Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RPH3AQ9Y2J0 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.84■□□□□ 0.13
RPH3AQ9Y2J0 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.84■□□□□ 0.13
RPH3AQ9Y2J0 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPH3AQ9Y2J0 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPH3AQ9Y2J0 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RPH3AQ9Y2J0 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.84■□□□□ 0.13
RPH3AQ9Y2J0 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RPH3AQ9Y2J0 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.84■□□□□ 0.13
RPH3AQ9Y2J0 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.84■□□□□ 0.13
RPH3AQ9Y2J0 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RPH3AQ9Y2J0 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPH3AQ9Y2J0 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPH3AQ9Y2J0 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RPH3AQ9Y2J0 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.84■□□□□ 0.13
RPH3AQ9Y2J0 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPH3AQ9Y2J0 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
RPH3AQ9Y2J0 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RPH3AQ9Y2J0 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
RPH3AQ9Y2J0 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.83■□□□□ 0.13
RPH3AQ9Y2J0 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RPH3AQ9Y2J0 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
RPH3AQ9Y2J0 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.83■□□□□ 0.13
RPH3AQ9Y2J0 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
RPH3AQ9Y2J0 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RPH3AQ9Y2J0 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPH3AQ9Y2J0 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.83■□□□□ 0.12
RPH3AQ9Y2J0 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.83■□□□□ 0.12
RPH3AQ9Y2J0 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
RPH3AQ9Y2J0 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.83■□□□□ 0.12
RPH3AQ9Y2J0 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPH3AQ9Y2J0 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.83■□□□□ 0.12
RPH3AQ9Y2J0 RPS2P1-201ENST00000434010 821 ntBASIC15.83■□□□□ 0.12
RPH3AQ9Y2J0 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPH3AQ9Y2J0 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.83■□□□□ 0.12
RPH3AQ9Y2J0 AC064862.7-201ENST00000604520 867 ntBASIC15.83■□□□□ 0.12
RPH3AQ9Y2J0 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.83■□□□□ 0.12
RPH3AQ9Y2J0 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.83■□□□□ 0.12
RPH3AQ9Y2J0 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RPH3AQ9Y2J0 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPH3AQ9Y2J0 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
RPH3AQ9Y2J0 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPH3AQ9Y2J0 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RPH3AQ9Y2J0 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPH3AQ9Y2J0 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
RPH3AQ9Y2J0 AL138688.1-201ENST00000624851 1594 ntBASIC15.83■□□□□ 0.12
RPH3AQ9Y2J0 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPH3AQ9Y2J0 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
RPH3AQ9Y2J0 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
RPH3AQ9Y2J0 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPH3AQ9Y2J0 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPH3AQ9Y2J0 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.83■□□□□ 0.12
RPH3AQ9Y2J0 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPH3AQ9Y2J0 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
RPH3AQ9Y2J0 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPH3AQ9Y2J0 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RPH3AQ9Y2J0 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
RPH3AQ9Y2J0 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RPH3AQ9Y2J0 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPH3AQ9Y2J0 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
RPH3AQ9Y2J0 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPH3AQ9Y2J0 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
RPH3AQ9Y2J0 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPH3AQ9Y2J0 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.82■□□□□ 0.12
RPH3AQ9Y2J0 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPH3AQ9Y2J0 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
RPH3AQ9Y2J0 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPH3AQ9Y2J0 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
RPH3AQ9Y2J0 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RPH3AQ9Y2J0 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPH3AQ9Y2J0 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.82■□□□□ 0.12
RPH3AQ9Y2J0 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.82■□□□□ 0.12
RPH3AQ9Y2J0 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RPH3AQ9Y2J0 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.82■□□□□ 0.12
RPH3AQ9Y2J0 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RPH3AQ9Y2J0 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.82■□□□□ 0.12
RPH3AQ9Y2J0 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.82■□□□□ 0.12
RPH3AQ9Y2J0 AL773604.1-201ENST00000617417 272 ntBASIC15.82■□□□□ 0.12
RPH3AQ9Y2J0 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RPH3AQ9Y2J0 AL022326.1-202ENST00000641533 845 ntBASIC15.82■□□□□ 0.12
RPH3AQ9Y2J0 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
RPH3AQ9Y2J0 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RPH3AQ9Y2J0 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPH3AQ9Y2J0 AC009336.1-201ENST00000608941 1553 ntBASIC15.82■□□□□ 0.12
RPH3AQ9Y2J0 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RPH3AQ9Y2J0 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPH3AQ9Y2J0 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.81■□□□□ 0.12
RPH3AQ9Y2J0 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPH3AQ9Y2J0 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPH3AQ9Y2J0 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
RPH3AQ9Y2J0 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RPH3AQ9Y2J0 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPH3AQ9Y2J0 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPH3AQ9Y2J0 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPH3AQ9Y2J0 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RPH3AQ9Y2J0 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPH3AQ9Y2J0 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPH3AQ9Y2J0 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RPH3AQ9Y2J0 MIR1233-2-201ENST00000408138 82 ntBASIC15.81■□□□□ 0.12
RPH3AQ9Y2J0 MIR1233-1-201ENST00000408722 82 ntBASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms