Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.44■□□□□ 0.38
HACD3Q9P035 MTDHP3-201ENST00000594186 672 ntBASIC17.44■□□□□ 0.38
HACD3Q9P035 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.44■□□□□ 0.38
HACD3Q9P035 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HACD3Q9P035 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HACD3Q9P035 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HACD3Q9P035 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HACD3Q9P035 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.44■□□□□ 0.38
HACD3Q9P035 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HACD3Q9P035 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
HACD3Q9P035 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HACD3Q9P035 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HACD3Q9P035 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HACD3Q9P035 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HACD3Q9P035 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.44■□□□□ 0.38
HACD3Q9P035 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.43■□□□□ 0.38
HACD3Q9P035 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
HACD3Q9P035 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.43■□□□□ 0.38
HACD3Q9P035 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HACD3Q9P035 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HACD3Q9P035 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
HACD3Q9P035 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.43■□□□□ 0.38
HACD3Q9P035 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HACD3Q9P035 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HACD3Q9P035 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HACD3Q9P035 AL135999.2-201ENST00000622438 1686 ntBASIC17.43■□□□□ 0.38
HACD3Q9P035 AC116353.5-201ENST00000638148 1699 ntBASIC17.43■□□□□ 0.38
HACD3Q9P035 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HACD3Q9P035 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HACD3Q9P035 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
HACD3Q9P035 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HACD3Q9P035 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.43■□□□□ 0.38
HACD3Q9P035 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HACD3Q9P035 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
HACD3Q9P035 DUSP5P1-201ENST00000441325 1139 ntBASIC17.43■□□□□ 0.38
HACD3Q9P035 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.43■□□□□ 0.38
HACD3Q9P035 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HACD3Q9P035 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HACD3Q9P035 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.43■□□□□ 0.38
HACD3Q9P035 AC008608.2-201ENST00000606089 416 ntBASIC17.43■□□□□ 0.38
HACD3Q9P035 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.43■□□□□ 0.38
HACD3Q9P035 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HACD3Q9P035 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
HACD3Q9P035 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HACD3Q9P035 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HACD3Q9P035 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HACD3Q9P035 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.43■□□□□ 0.38
HACD3Q9P035 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HACD3Q9P035 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.43■□□□□ 0.38
HACD3Q9P035 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HACD3Q9P035 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
HACD3Q9P035 AL356309.3-201ENST00000624132 1934 ntBASIC17.43■□□□□ 0.38
HACD3Q9P035 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HACD3Q9P035 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
HACD3Q9P035 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HACD3Q9P035 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HACD3Q9P035 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HACD3Q9P035 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.42■□□□□ 0.38
HACD3Q9P035 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HACD3Q9P035 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HACD3Q9P035 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HACD3Q9P035 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HACD3Q9P035 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HACD3Q9P035 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HACD3Q9P035 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.42■□□□□ 0.38
HACD3Q9P035 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
HACD3Q9P035 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HACD3Q9P035 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.42■□□□□ 0.38
HACD3Q9P035 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.42■□□□□ 0.38
HACD3Q9P035 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
HACD3Q9P035 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HACD3Q9P035 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HACD3Q9P035 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HACD3Q9P035 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.42■□□□□ 0.38
HACD3Q9P035 SCARNA2-201ENST00000458748 420 ntBASIC17.42■□□□□ 0.38
HACD3Q9P035 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.42■□□□□ 0.38
HACD3Q9P035 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.42■□□□□ 0.38
HACD3Q9P035 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.42■□□□□ 0.38
HACD3Q9P035 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.42■□□□□ 0.38
HACD3Q9P035 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.42■□□□□ 0.38
HACD3Q9P035 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.42■□□□□ 0.38
HACD3Q9P035 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HACD3Q9P035 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.42■□□□□ 0.38
HACD3Q9P035 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HACD3Q9P035 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HACD3Q9P035 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HACD3Q9P035 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
HACD3Q9P035 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HACD3Q9P035 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
HACD3Q9P035 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HACD3Q9P035 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
HACD3Q9P035 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
HACD3Q9P035 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
HACD3Q9P035 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HACD3Q9P035 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.42■□□□□ 0.38
HACD3Q9P035 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HACD3Q9P035 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.41■□□□□ 0.38
HACD3Q9P035 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HACD3Q9P035 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HACD3Q9P035 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms