Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP29Q9HBJ7 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP29Q9HBJ7 AP000867.4-201ENST00000641616 219 ntBASIC17.74■□□□□ 0.43
USP29Q9HBJ7 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP29Q9HBJ7 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP29Q9HBJ7 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.74■□□□□ 0.43
USP29Q9HBJ7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
USP29Q9HBJ7 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.74■□□□□ 0.43
USP29Q9HBJ7 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.74■□□□□ 0.43
USP29Q9HBJ7 FLJ38576-201ENST00000623820 2459 ntBASIC17.74■□□□□ 0.43
USP29Q9HBJ7 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
USP29Q9HBJ7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP29Q9HBJ7 HLA-A-201ENST00000376802 1334 ntBASIC17.73■□□□□ 0.43
USP29Q9HBJ7 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.73■□□□□ 0.43
USP29Q9HBJ7 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.73■□□□□ 0.43
USP29Q9HBJ7 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
USP29Q9HBJ7 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP29Q9HBJ7 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP29Q9HBJ7 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP29Q9HBJ7 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP29Q9HBJ7 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.73■□□□□ 0.43
USP29Q9HBJ7 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP29Q9HBJ7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
USP29Q9HBJ7 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.73■□□□□ 0.43
USP29Q9HBJ7 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.73■□□□□ 0.43
USP29Q9HBJ7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP29Q9HBJ7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP29Q9HBJ7 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP29Q9HBJ7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP29Q9HBJ7 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
USP29Q9HBJ7 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.73■□□□□ 0.43
USP29Q9HBJ7 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.73■□□□□ 0.43
USP29Q9HBJ7 MRPL3P1-201ENST00000400109 1033 ntBASIC17.73■□□□□ 0.43
USP29Q9HBJ7 KLF4P1-201ENST00000412782 1185 ntBASIC17.73■□□□□ 0.43
USP29Q9HBJ7 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.73■□□□□ 0.43
USP29Q9HBJ7 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.73■□□□□ 0.43
USP29Q9HBJ7 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.73■□□□□ 0.43
USP29Q9HBJ7 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.73■□□□□ 0.43
USP29Q9HBJ7 AC096582.2-201ENST00000510860 516 ntBASIC17.73■□□□□ 0.43
USP29Q9HBJ7 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.73■□□□□ 0.43
USP29Q9HBJ7 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.73■□□□□ 0.43
USP29Q9HBJ7 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.73■□□□□ 0.43
USP29Q9HBJ7 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.73■□□□□ 0.43
USP29Q9HBJ7 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.73■□□□□ 0.43
USP29Q9HBJ7 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.73■□□□□ 0.43
USP29Q9HBJ7 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
USP29Q9HBJ7 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
USP29Q9HBJ7 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
USP29Q9HBJ7 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP29Q9HBJ7 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP29Q9HBJ7 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP29Q9HBJ7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
USP29Q9HBJ7 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
USP29Q9HBJ7 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP29Q9HBJ7 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP29Q9HBJ7 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP29Q9HBJ7 AC046158.3-201ENST00000624947 2558 ntBASIC17.73■□□□□ 0.43
USP29Q9HBJ7 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
USP29Q9HBJ7 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP29Q9HBJ7 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP29Q9HBJ7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.72■□□□□ 0.43
USP29Q9HBJ7 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
USP29Q9HBJ7 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
USP29Q9HBJ7 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.72■□□□□ 0.43
USP29Q9HBJ7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP29Q9HBJ7 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.72■□□□□ 0.43
USP29Q9HBJ7 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP29Q9HBJ7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.72■□□□□ 0.43
USP29Q9HBJ7 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP29Q9HBJ7 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP29Q9HBJ7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
USP29Q9HBJ7 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.72■□□□□ 0.43
USP29Q9HBJ7 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.72■□□□□ 0.43
USP29Q9HBJ7 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
USP29Q9HBJ7 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.72■□□□□ 0.43
USP29Q9HBJ7 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.72■□□□□ 0.43
USP29Q9HBJ7 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP29Q9HBJ7 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
USP29Q9HBJ7 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP29Q9HBJ7 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP29Q9HBJ7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.72■□□□□ 0.43
USP29Q9HBJ7 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
USP29Q9HBJ7 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
USP29Q9HBJ7 AC079776.4-201ENST00000511039 504 ntBASIC17.72■□□□□ 0.43
USP29Q9HBJ7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.72■□□□□ 0.43
USP29Q9HBJ7 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.72■□□□□ 0.43
USP29Q9HBJ7 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.72■□□□□ 0.43
USP29Q9HBJ7 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.72■□□□□ 0.43
USP29Q9HBJ7 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP29Q9HBJ7 AL591684.3-201ENST00000605187 298 ntBASIC17.72■□□□□ 0.43
USP29Q9HBJ7 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.72■□□□□ 0.43
USP29Q9HBJ7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.72■□□□□ 0.43
USP29Q9HBJ7 AC114341.1-201ENST00000618070 349 ntBASIC17.72■□□□□ 0.43
USP29Q9HBJ7 AC023511.2-201ENST00000618803 211 ntBASIC17.72■□□□□ 0.43
USP29Q9HBJ7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
USP29Q9HBJ7 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP29Q9HBJ7 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP29Q9HBJ7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP29Q9HBJ7 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.72■□□□□ 0.43
USP29Q9HBJ7 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms