Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 CEND1P1-201ENST00000451006 455 ntBASIC18.5■□□□□ 0.55
NXF3Q9H4D5 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.5■□□□□ 0.55
NXF3Q9H4D5 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.5■□□□□ 0.55
NXF3Q9H4D5 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.5■□□□□ 0.55
NXF3Q9H4D5 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.5■□□□□ 0.55
NXF3Q9H4D5 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NXF3Q9H4D5 REXO1L3P-201ENST00000622202 1288 ntBASIC18.5■□□□□ 0.55
NXF3Q9H4D5 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NXF3Q9H4D5 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NXF3Q9H4D5 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.5■□□□□ 0.55
NXF3Q9H4D5 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.5■□□□□ 0.55
NXF3Q9H4D5 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NXF3Q9H4D5 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.49■□□□□ 0.55
NXF3Q9H4D5 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.49■□□□□ 0.55
NXF3Q9H4D5 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NXF3Q9H4D5 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
NXF3Q9H4D5 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NXF3Q9H4D5 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.49■□□□□ 0.55
NXF3Q9H4D5 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
NXF3Q9H4D5 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.49■□□□□ 0.55
NXF3Q9H4D5 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
NXF3Q9H4D5 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NXF3Q9H4D5 CROCCP2-202ENST00000412962 2773 ntBASIC18.49■□□□□ 0.55
NXF3Q9H4D5 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
NXF3Q9H4D5 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
NXF3Q9H4D5 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NXF3Q9H4D5 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
NXF3Q9H4D5 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.49■□□□□ 0.55
NXF3Q9H4D5 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.49■□□□□ 0.55
NXF3Q9H4D5 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NXF3Q9H4D5 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
NXF3Q9H4D5 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
NXF3Q9H4D5 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NXF3Q9H4D5 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NXF3Q9H4D5 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
NXF3Q9H4D5 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NXF3Q9H4D5 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NXF3Q9H4D5 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.49■□□□□ 0.55
NXF3Q9H4D5 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
NXF3Q9H4D5 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NXF3Q9H4D5 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
NXF3Q9H4D5 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NXF3Q9H4D5 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.49■□□□□ 0.55
NXF3Q9H4D5 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
NXF3Q9H4D5 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NXF3Q9H4D5 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 AP002472.1-201ENST00000577490 586 ntBASIC18.48■□□□□ 0.55
NXF3Q9H4D5 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 AC092902.6-201ENST00000641783 218 ntBASIC18.48■□□□□ 0.55
NXF3Q9H4D5 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NXF3Q9H4D5 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NXF3Q9H4D5 PP12613-201ENST00000424958 2230 ntBASIC18.47■□□□□ 0.55
NXF3Q9H4D5 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NXF3Q9H4D5 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NXF3Q9H4D5 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.47■□□□□ 0.55
NXF3Q9H4D5 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NXF3Q9H4D5 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NXF3Q9H4D5 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms