Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL25A1Q9BXS0 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL25A1Q9BXS0 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.16■□□□□ 0.34
COL25A1Q9BXS0 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL25A1Q9BXS0 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC17.16■□□□□ 0.34
COL25A1Q9BXS0 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC17.16■□□□□ 0.34
COL25A1Q9BXS0 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.16■□□□□ 0.34
COL25A1Q9BXS0 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
COL25A1Q9BXS0 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.16■□□□□ 0.34
COL25A1Q9BXS0 FAM86HP-204ENST00000513466 959 ntBASIC17.16■□□□□ 0.34
COL25A1Q9BXS0 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.16■□□□□ 0.34
COL25A1Q9BXS0 MIR3619-201ENST00000579667 83 ntBASIC17.16■□□□□ 0.34
COL25A1Q9BXS0 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.16■□□□□ 0.34
COL25A1Q9BXS0 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.16■□□□□ 0.34
COL25A1Q9BXS0 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.16■□□□□ 0.34
COL25A1Q9BXS0 AL031055.1-201ENST00000606362 631 ntBASIC17.16■□□□□ 0.34
COL25A1Q9BXS0 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COL25A1Q9BXS0 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.16■□□□□ 0.34
COL25A1Q9BXS0 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COL25A1Q9BXS0 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL25A1Q9BXS0 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COL25A1Q9BXS0 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.16■□□□□ 0.34
COL25A1Q9BXS0 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.16■□□□□ 0.34
COL25A1Q9BXS0 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.16■□□□□ 0.34
COL25A1Q9BXS0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.16■□□□□ 0.34
COL25A1Q9BXS0 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL25A1Q9BXS0 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL25A1Q9BXS0 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.15■□□□□ 0.34
COL25A1Q9BXS0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.15■□□□□ 0.34
COL25A1Q9BXS0 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
COL25A1Q9BXS0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.15■□□□□ 0.34
COL25A1Q9BXS0 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL25A1Q9BXS0 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.15■□□□□ 0.34
COL25A1Q9BXS0 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL25A1Q9BXS0 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL25A1Q9BXS0 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL25A1Q9BXS0 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL25A1Q9BXS0 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.15■□□□□ 0.34
COL25A1Q9BXS0 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.15■□□□□ 0.34
COL25A1Q9BXS0 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.15■□□□□ 0.34
COL25A1Q9BXS0 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL25A1Q9BXS0 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
COL25A1Q9BXS0 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.15■□□□□ 0.34
COL25A1Q9BXS0 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC17.15■□□□□ 0.34
COL25A1Q9BXS0 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.15■□□□□ 0.34
COL25A1Q9BXS0 AC138627.1-207ENST00000641560 1006 ntBASIC17.15■□□□□ 0.34
COL25A1Q9BXS0 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL25A1Q9BXS0 CLK3P2-201ENST00000427566 1453 ntBASIC17.15■□□□□ 0.34
COL25A1Q9BXS0 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL25A1Q9BXS0 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.15■□□□□ 0.34
COL25A1Q9BXS0 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL25A1Q9BXS0 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.15■□□□□ 0.34
COL25A1Q9BXS0 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL25A1Q9BXS0 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.15■□□□□ 0.34
COL25A1Q9BXS0 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL25A1Q9BXS0 TCF3P1-201ENST00000423021 1937 ntBASIC17.15■□□□□ 0.34
COL25A1Q9BXS0 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL25A1Q9BXS0 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL25A1Q9BXS0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL25A1Q9BXS0 EGFEM1P-202ENST00000431685 1563 ntBASIC17.15■□□□□ 0.34
COL25A1Q9BXS0 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
COL25A1Q9BXS0 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL25A1Q9BXS0 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COL25A1Q9BXS0 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL25A1Q9BXS0 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COL25A1Q9BXS0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL25A1Q9BXS0 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
COL25A1Q9BXS0 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL25A1Q9BXS0 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COL25A1Q9BXS0 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC17.14■□□□□ 0.33
COL25A1Q9BXS0 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.14■□□□□ 0.33
COL25A1Q9BXS0 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL25A1Q9BXS0 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.14■□□□□ 0.33
COL25A1Q9BXS0 HLA-DQB2-229ENST00000411527 1059 ntBASIC17.14■□□□□ 0.33
COL25A1Q9BXS0 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.14■□□□□ 0.33
COL25A1Q9BXS0 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC17.14■□□□□ 0.33
COL25A1Q9BXS0 HIST2H2BC-201ENST00000498492 580 ntBASIC17.14■□□□□ 0.33
COL25A1Q9BXS0 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
COL25A1Q9BXS0 AC073389.1-201ENST00000595595 795 ntBASIC17.14■□□□□ 0.33
COL25A1Q9BXS0 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
COL25A1Q9BXS0 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL25A1Q9BXS0 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL25A1Q9BXS0 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL25A1Q9BXS0 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.14■□□□□ 0.33
COL25A1Q9BXS0 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.14■□□□□ 0.33
COL25A1Q9BXS0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL25A1Q9BXS0 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL25A1Q9BXS0 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL25A1Q9BXS0 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
COL25A1Q9BXS0 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
COL25A1Q9BXS0 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
COL25A1Q9BXS0 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COL25A1Q9BXS0 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL25A1Q9BXS0 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL25A1Q9BXS0 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL25A1Q9BXS0 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
COL25A1Q9BXS0 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COL25A1Q9BXS0 RNU1-129P-201ENST00000384064 167 ntBASIC17.13■□□□□ 0.33
COL25A1Q9BXS0 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COL25A1Q9BXS0 MAGEA5-201ENST00000446757 942 ntBASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms