Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC11.47□□□□□ -0.57
LITAFQ99732 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC11.47□□□□□ -0.57
LITAFQ99732 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
LITAFQ99732 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC11.47□□□□□ -0.57
LITAFQ99732 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC11.47□□□□□ -0.57
LITAFQ99732 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LITAFQ99732 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC11.46□□□□□ -0.57
LITAFQ99732 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
LITAFQ99732 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
LITAFQ99732 PC-208ENST00000529047 1607 ntTSL 3 BASIC11.46□□□□□ -0.57
LITAFQ99732 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LITAFQ99732 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LITAFQ99732 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LITAFQ99732 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LITAFQ99732 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
LITAFQ99732 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LITAFQ99732 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
LITAFQ99732 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LITAFQ99732 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
LITAFQ99732 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC11.46□□□□□ -0.57
LITAFQ99732 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC11.46□□□□□ -0.57
LITAFQ99732 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LITAFQ99732 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LITAFQ99732 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
LITAFQ99732 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LITAFQ99732 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
LITAFQ99732 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LITAFQ99732 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LITAFQ99732 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
LITAFQ99732 GRAMD4P1-201ENST00000435181 1110 ntBASIC11.46□□□□□ -0.57
LITAFQ99732 FDX2-206ENST00000492239 773 ntTSL 2 BASIC11.46□□□□□ -0.57
LITAFQ99732 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LITAFQ99732 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC11.46□□□□□ -0.57
LITAFQ99732 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC11.46□□□□□ -0.57
LITAFQ99732 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC11.46□□□□□ -0.57
LITAFQ99732 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC11.46□□□□□ -0.57
LITAFQ99732 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
LITAFQ99732 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC11.46□□□□□ -0.57
LITAFQ99732 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LITAFQ99732 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC11.46□□□□□ -0.57
LITAFQ99732 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
LITAFQ99732 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
LITAFQ99732 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
LITAFQ99732 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
LITAFQ99732 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
LITAFQ99732 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC11.46□□□□□ -0.58
LITAFQ99732 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC11.46□□□□□ -0.58
LITAFQ99732 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC11.46□□□□□ -0.58
LITAFQ99732 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
LITAFQ99732 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC11.46□□□□□ -0.58
LITAFQ99732 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
LITAFQ99732 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
LITAFQ99732 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
LITAFQ99732 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
LITAFQ99732 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
LITAFQ99732 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
LITAFQ99732 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
LITAFQ99732 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
LITAFQ99732 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LITAFQ99732 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LITAFQ99732 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
LITAFQ99732 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LITAFQ99732 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LITAFQ99732 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LITAFQ99732 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC11.45□□□□□ -0.58
LITAFQ99732 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LITAFQ99732 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC11.45□□□□□ -0.58
LITAFQ99732 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
LITAFQ99732 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
LITAFQ99732 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LITAFQ99732 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
LITAFQ99732 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC11.45□□□□□ -0.58
LITAFQ99732 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC11.45□□□□□ -0.58
LITAFQ99732 GCK-202ENST00000345378 2421 ntTSL 2 BASIC11.45□□□□□ -0.58
LITAFQ99732 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
LITAFQ99732 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
LITAFQ99732 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LITAFQ99732 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC11.45□□□□□ -0.58
LITAFQ99732 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LITAFQ99732 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC11.45□□□□□ -0.58
LITAFQ99732 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC11.45□□□□□ -0.58
LITAFQ99732 SEC1P-202ENST00000473944 940 ntBASIC11.45□□□□□ -0.58
LITAFQ99732 AL162430.1-201ENST00000480705 870 ntBASIC11.45□□□□□ -0.58
LITAFQ99732 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC11.45□□□□□ -0.58
LITAFQ99732 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
LITAFQ99732 AP003041.3-201ENST00000527151 707 ntBASIC11.45□□□□□ -0.58
LITAFQ99732 AF186192.3-201ENST00000583427 947 ntBASIC11.45□□□□□ -0.58
LITAFQ99732 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC11.45□□□□□ -0.58
LITAFQ99732 TMED1-207ENST00000591695 809 ntTSL 5 BASIC11.45□□□□□ -0.58
LITAFQ99732 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC11.45□□□□□ -0.58
LITAFQ99732 GXYLT1P5-201ENST00000614548 1189 ntBASIC11.45□□□□□ -0.58
LITAFQ99732 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LITAFQ99732 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
LITAFQ99732 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC11.45□□□□□ -0.58
LITAFQ99732 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LITAFQ99732 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LITAFQ99732 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
LITAFQ99732 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
LITAFQ99732 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC11.45□□□□□ -0.58
LITAFQ99732 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC11.45□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms