Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CKAP2Q8WWK9 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.12■□□□□ 0.33
CKAP2Q8WWK9 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CKAP2Q8WWK9 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CKAP2Q8WWK9 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CKAP2Q8WWK9 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CKAP2Q8WWK9 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CKAP2Q8WWK9 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CKAP2Q8WWK9 RPS2P55-201ENST00000397318 883 ntBASIC17.12■□□□□ 0.33
CKAP2Q8WWK9 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.12■□□□□ 0.33
CKAP2Q8WWK9 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.12■□□□□ 0.33
CKAP2Q8WWK9 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.12■□□□□ 0.33
CKAP2Q8WWK9 AP006294.2-201ENST00000641667 209 ntBASIC17.12■□□□□ 0.33
CKAP2Q8WWK9 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CKAP2Q8WWK9 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.12■□□□□ 0.33
CKAP2Q8WWK9 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CKAP2Q8WWK9 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.12■□□□□ 0.33
CKAP2Q8WWK9 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
CKAP2Q8WWK9 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CKAP2Q8WWK9 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CKAP2Q8WWK9 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CKAP2Q8WWK9 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CKAP2Q8WWK9 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.12■□□□□ 0.33
CKAP2Q8WWK9 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.12■□□□□ 0.33
CKAP2Q8WWK9 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.12■□□□□ 0.33
CKAP2Q8WWK9 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CKAP2Q8WWK9 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CKAP2Q8WWK9 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.11■□□□□ 0.33
CKAP2Q8WWK9 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CKAP2Q8WWK9 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CKAP2Q8WWK9 AC023824.1-201ENST00000562945 2975 ntBASIC17.11■□□□□ 0.33
CKAP2Q8WWK9 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CKAP2Q8WWK9 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CKAP2Q8WWK9 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CKAP2Q8WWK9 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CKAP2Q8WWK9 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.11■□□□□ 0.33
CKAP2Q8WWK9 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CKAP2Q8WWK9 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.11■□□□□ 0.33
CKAP2Q8WWK9 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CKAP2Q8WWK9 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CKAP2Q8WWK9 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CKAP2Q8WWK9 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CKAP2Q8WWK9 AP002490.2-201ENST00000524791 560 ntBASIC17.11■□□□□ 0.33
CKAP2Q8WWK9 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.11■□□□□ 0.33
CKAP2Q8WWK9 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.11■□□□□ 0.33
CKAP2Q8WWK9 NEK4P2-201ENST00000580004 1012 ntBASIC17.11■□□□□ 0.33
CKAP2Q8WWK9 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.11■□□□□ 0.33
CKAP2Q8WWK9 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.11■□□□□ 0.33
CKAP2Q8WWK9 AC026471.5-201ENST00000615068 467 ntBASIC17.11■□□□□ 0.33
CKAP2Q8WWK9 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CKAP2Q8WWK9 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CKAP2Q8WWK9 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.11■□□□□ 0.33
CKAP2Q8WWK9 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CKAP2Q8WWK9 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CKAP2Q8WWK9 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CKAP2Q8WWK9 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CKAP2Q8WWK9 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CKAP2Q8WWK9 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CKAP2Q8WWK9 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CKAP2Q8WWK9 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CKAP2Q8WWK9 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CKAP2Q8WWK9 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.11■□□□□ 0.33
CKAP2Q8WWK9 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.11■□□□□ 0.33
CKAP2Q8WWK9 AC006538.1-201ENST00000567905 1585 ntBASIC17.11■□□□□ 0.33
CKAP2Q8WWK9 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CKAP2Q8WWK9 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CKAP2Q8WWK9 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CKAP2Q8WWK9 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CKAP2Q8WWK9 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CKAP2Q8WWK9 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CKAP2Q8WWK9 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.1■□□□□ 0.33
CKAP2Q8WWK9 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CKAP2Q8WWK9 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CKAP2Q8WWK9 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CKAP2Q8WWK9 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CKAP2Q8WWK9 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CKAP2Q8WWK9 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CKAP2Q8WWK9 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CKAP2Q8WWK9 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CKAP2Q8WWK9 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CKAP2Q8WWK9 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CKAP2Q8WWK9 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CKAP2Q8WWK9 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CKAP2Q8WWK9 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CKAP2Q8WWK9 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CKAP2Q8WWK9 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.1■□□□□ 0.33
CKAP2Q8WWK9 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.1■□□□□ 0.33
CKAP2Q8WWK9 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CKAP2Q8WWK9 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CKAP2Q8WWK9 AC107956.1-201ENST00000494359 873 ntBASIC17.1■□□□□ 0.33
CKAP2Q8WWK9 AC093827.2-201ENST00000512654 315 ntBASIC17.1■□□□□ 0.33
CKAP2Q8WWK9 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.1■□□□□ 0.33
CKAP2Q8WWK9 AC019129.2-201ENST00000609837 1235 ntBASIC17.1■□□□□ 0.33
CKAP2Q8WWK9 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.1■□□□□ 0.33
CKAP2Q8WWK9 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CKAP2Q8WWK9 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CKAP2Q8WWK9 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
CKAP2Q8WWK9 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.1■□□□□ 0.33
CKAP2Q8WWK9 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.1■□□□□ 0.33
CKAP2Q8WWK9 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms