Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC26.66■■□□□ 1.86
VPS8Q8N3P4 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
VPS8Q8N3P4 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
VPS8Q8N3P4 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC26.65■■□□□ 1.86
VPS8Q8N3P4 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC26.65■■□□□ 1.86
VPS8Q8N3P4 RNU1-129P-201ENST00000384064 167 ntBASIC26.65■■□□□ 1.86
VPS8Q8N3P4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
VPS8Q8N3P4 HTR5BP-201ENST00000430851 1154 ntBASIC26.65■■□□□ 1.86
VPS8Q8N3P4 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
VPS8Q8N3P4 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC26.65■■□□□ 1.86
VPS8Q8N3P4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
VPS8Q8N3P4 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC26.65■■□□□ 1.86
VPS8Q8N3P4 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC26.65■■□□□ 1.86
VPS8Q8N3P4 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC26.65■■□□□ 1.86
VPS8Q8N3P4 U1.21-201ENST00000580816 167 ntBASIC26.65■■□□□ 1.86
VPS8Q8N3P4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
VPS8Q8N3P4 AC131009.4-201ENST00000624048 1740 ntBASIC26.65■■□□□ 1.86
VPS8Q8N3P4 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
VPS8Q8N3P4 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
VPS8Q8N3P4 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
VPS8Q8N3P4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC26.65■■□□□ 1.86
VPS8Q8N3P4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
VPS8Q8N3P4 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
VPS8Q8N3P4 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC26.65■■□□□ 1.86
VPS8Q8N3P4 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
VPS8Q8N3P4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
VPS8Q8N3P4 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
VPS8Q8N3P4 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
VPS8Q8N3P4 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC26.65■■□□□ 1.86
VPS8Q8N3P4 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
VPS8Q8N3P4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC26.65■■□□□ 1.86
VPS8Q8N3P4 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
VPS8Q8N3P4 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
VPS8Q8N3P4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.86
VPS8Q8N3P4 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
VPS8Q8N3P4 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
VPS8Q8N3P4 AP001094.4-201ENST00000579008 2176 ntBASIC26.64■■□□□ 1.86
VPS8Q8N3P4 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
VPS8Q8N3P4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC26.64■■□□□ 1.85
VPS8Q8N3P4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.85
VPS8Q8N3P4 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
VPS8Q8N3P4 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC26.64■■□□□ 1.85
VPS8Q8N3P4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC26.64■■□□□ 1.85
VPS8Q8N3P4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC26.64■■□□□ 1.85
VPS8Q8N3P4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC26.64■■□□□ 1.85
VPS8Q8N3P4 MIR4469-201ENST00000583919 79 ntBASIC26.64■■□□□ 1.85
VPS8Q8N3P4 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC26.64■■□□□ 1.85
VPS8Q8N3P4 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
VPS8Q8N3P4 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC26.63■■□□□ 1.85
VPS8Q8N3P4 LINC00895-201ENST00000629028 1637 ntBASIC26.63■■□□□ 1.85
VPS8Q8N3P4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
VPS8Q8N3P4 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
VPS8Q8N3P4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
VPS8Q8N3P4 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
VPS8Q8N3P4 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
VPS8Q8N3P4 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
VPS8Q8N3P4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
VPS8Q8N3P4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC26.63■■□□□ 1.85
VPS8Q8N3P4 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
VPS8Q8N3P4 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
VPS8Q8N3P4 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
VPS8Q8N3P4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
VPS8Q8N3P4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
VPS8Q8N3P4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
VPS8Q8N3P4 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC26.63■■□□□ 1.85
VPS8Q8N3P4 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC26.63■■□□□ 1.85
VPS8Q8N3P4 MTRF1LP2-201ENST00000506027 1122 ntBASIC26.63■■□□□ 1.85
VPS8Q8N3P4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC26.63■■□□□ 1.85
VPS8Q8N3P4 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC26.63■■□□□ 1.85
VPS8Q8N3P4 AC109635.5-201ENST00000533593 962 ntBASIC26.63■■□□□ 1.85
VPS8Q8N3P4 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
VPS8Q8N3P4 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC26.63■■□□□ 1.85
VPS8Q8N3P4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC26.62■■□□□ 1.85
VPS8Q8N3P4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC26.62■■□□□ 1.85
VPS8Q8N3P4 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC26.62■■□□□ 1.85
VPS8Q8N3P4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC26.62■■□□□ 1.85
VPS8Q8N3P4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC26.62■■□□□ 1.85
VPS8Q8N3P4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
VPS8Q8N3P4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
VPS8Q8N3P4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
VPS8Q8N3P4 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
VPS8Q8N3P4 AL355306.1-201ENST00000415580 579 ntBASIC26.62■■□□□ 1.85
VPS8Q8N3P4 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC26.62■■□□□ 1.85
VPS8Q8N3P4 AC087641.1-201ENST00000557561 1021 ntBASIC26.62■■□□□ 1.85
VPS8Q8N3P4 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC26.62■■□□□ 1.85
VPS8Q8N3P4 CYP2A7P1-201ENST00000595391 815 ntBASIC26.62■■□□□ 1.85
VPS8Q8N3P4 AC013467.2-201ENST00000605472 835 ntBASIC26.62■■□□□ 1.85
VPS8Q8N3P4 AL031055.1-201ENST00000606362 631 ntBASIC26.62■■□□□ 1.85
VPS8Q8N3P4 AC134684.3-201ENST00000641758 218 ntBASIC26.62■■□□□ 1.85
VPS8Q8N3P4 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC26.62■■□□□ 1.85
VPS8Q8N3P4 AC012569.1-201ENST00000591191 1524 ntBASIC26.62■■□□□ 1.85
VPS8Q8N3P4 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
VPS8Q8N3P4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
VPS8Q8N3P4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
VPS8Q8N3P4 LETM1P2-201ENST00000597330 2178 ntBASIC26.61■■□□□ 1.85
VPS8Q8N3P4 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC26.61■■□□□ 1.85
VPS8Q8N3P4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
VPS8Q8N3P4 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
VPS8Q8N3P4 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
VPS8Q8N3P4 AC005829.1-201ENST00000570002 483 ntBASIC26.61■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms