Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF44Q7L0R7 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RNF44Q7L0R7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.52■□□□□ 0.24
RNF44Q7L0R7 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
RNF44Q7L0R7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.52■□□□□ 0.24
RNF44Q7L0R7 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF44Q7L0R7 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
RNF44Q7L0R7 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RNF44Q7L0R7 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF44Q7L0R7 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF44Q7L0R7 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF44Q7L0R7 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF44Q7L0R7 IGHV3-22-201ENST00000520721 359 ntBASIC16.52■□□□□ 0.24
RNF44Q7L0R7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.52■□□□□ 0.24
RNF44Q7L0R7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.52■□□□□ 0.24
RNF44Q7L0R7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.52■□□□□ 0.24
RNF44Q7L0R7 AC120114.3-201ENST00000611923 658 ntBASIC16.52■□□□□ 0.24
RNF44Q7L0R7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.52■□□□□ 0.24
RNF44Q7L0R7 AC117500.6-201ENST00000624871 588 ntBASIC16.52■□□□□ 0.24
RNF44Q7L0R7 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.52■□□□□ 0.24
RNF44Q7L0R7 PGM5P2-202ENST00000637225 1043 ntBASIC16.52■□□□□ 0.24
RNF44Q7L0R7 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF44Q7L0R7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.52■□□□□ 0.24
RNF44Q7L0R7 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RNF44Q7L0R7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.52■□□□□ 0.23
RNF44Q7L0R7 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
RNF44Q7L0R7 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF44Q7L0R7 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF44Q7L0R7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.52■□□□□ 0.23
RNF44Q7L0R7 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF44Q7L0R7 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF44Q7L0R7 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF44Q7L0R7 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF44Q7L0R7 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF44Q7L0R7 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF44Q7L0R7 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.51■□□□□ 0.23
RNF44Q7L0R7 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF44Q7L0R7 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF44Q7L0R7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF44Q7L0R7 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF44Q7L0R7 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RNF44Q7L0R7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF44Q7L0R7 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF44Q7L0R7 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.51■□□□□ 0.23
RNF44Q7L0R7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
RNF44Q7L0R7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RNF44Q7L0R7 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
RNF44Q7L0R7 AL805961.1-202ENST00000641562 540 ntBASIC16.51■□□□□ 0.23
RNF44Q7L0R7 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.51■□□□□ 0.23
RNF44Q7L0R7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF44Q7L0R7 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.51■□□□□ 0.23
RNF44Q7L0R7 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RNF44Q7L0R7 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF44Q7L0R7 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF44Q7L0R7 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF44Q7L0R7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RNF44Q7L0R7 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF44Q7L0R7 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RNF44Q7L0R7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF44Q7L0R7 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF44Q7L0R7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RNF44Q7L0R7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF44Q7L0R7 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF44Q7L0R7 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF44Q7L0R7 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF44Q7L0R7 AL590787.1-201ENST00000568856 1315 ntBASIC16.5■□□□□ 0.23
RNF44Q7L0R7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF44Q7L0R7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF44Q7L0R7 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF44Q7L0R7 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RNF44Q7L0R7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
RNF44Q7L0R7 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF44Q7L0R7 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF44Q7L0R7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF44Q7L0R7 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF44Q7L0R7 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF44Q7L0R7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF44Q7L0R7 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.5■□□□□ 0.23
RNF44Q7L0R7 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.5■□□□□ 0.23
RNF44Q7L0R7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.5■□□□□ 0.23
RNF44Q7L0R7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF44Q7L0R7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.5■□□□□ 0.23
RNF44Q7L0R7 AC005593.1-201ENST00000624894 515 ntBASIC16.5■□□□□ 0.23
RNF44Q7L0R7 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.5■□□□□ 0.23
RNF44Q7L0R7 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
RNF44Q7L0R7 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF44Q7L0R7 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF44Q7L0R7 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF44Q7L0R7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.5■□□□□ 0.23
RNF44Q7L0R7 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
RNF44Q7L0R7 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF44Q7L0R7 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RNF44Q7L0R7 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.5■□□□□ 0.23
RNF44Q7L0R7 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF44Q7L0R7 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF44Q7L0R7 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF44Q7L0R7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
RNF44Q7L0R7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.49■□□□□ 0.23
RNF44Q7L0R7 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
RNF44Q7L0R7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms