Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.52■□□□□ 0.23
RIF1Q5UIP0 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RIF1Q5UIP0 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.52■□□□□ 0.23
RIF1Q5UIP0 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
RIF1Q5UIP0 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RIF1Q5UIP0 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.52■□□□□ 0.23
RIF1Q5UIP0 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RIF1Q5UIP0 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RIF1Q5UIP0 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RIF1Q5UIP0 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.52■□□□□ 0.23
RIF1Q5UIP0 IGHJ2P-201ENST00000454480 60 ntBASIC16.52■□□□□ 0.23
RIF1Q5UIP0 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.52■□□□□ 0.23
RIF1Q5UIP0 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.52■□□□□ 0.23
RIF1Q5UIP0 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.52■□□□□ 0.23
RIF1Q5UIP0 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.52■□□□□ 0.23
RIF1Q5UIP0 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.52■□□□□ 0.23
RIF1Q5UIP0 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RIF1Q5UIP0 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.52■□□□□ 0.23
RIF1Q5UIP0 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RIF1Q5UIP0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RIF1Q5UIP0 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.51■□□□□ 0.23
RIF1Q5UIP0 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RIF1Q5UIP0 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RIF1Q5UIP0 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RIF1Q5UIP0 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.51■□□□□ 0.23
RIF1Q5UIP0 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RIF1Q5UIP0 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC16.51■□□□□ 0.23
RIF1Q5UIP0 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RIF1Q5UIP0 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
RIF1Q5UIP0 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RIF1Q5UIP0 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RIF1Q5UIP0 GPAA1P2-201ENST00000417923 928 ntBASIC16.51■□□□□ 0.23
RIF1Q5UIP0 AC142381.1-201ENST00000426099 345 ntBASIC16.51■□□□□ 0.23
RIF1Q5UIP0 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RIF1Q5UIP0 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RIF1Q5UIP0 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RIF1Q5UIP0 CTBP2P3-201ENST00000585629 1255 ntBASIC16.51■□□□□ 0.23
RIF1Q5UIP0 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.51■□□□□ 0.23
RIF1Q5UIP0 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RIF1Q5UIP0 AC006538.1-201ENST00000567905 1585 ntBASIC16.51■□□□□ 0.23
RIF1Q5UIP0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RIF1Q5UIP0 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RIF1Q5UIP0 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RIF1Q5UIP0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RIF1Q5UIP0 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.51■□□□□ 0.23
RIF1Q5UIP0 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RIF1Q5UIP0 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.51■□□□□ 0.23
RIF1Q5UIP0 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RIF1Q5UIP0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RIF1Q5UIP0 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RIF1Q5UIP0 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RIF1Q5UIP0 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RIF1Q5UIP0 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.51■□□□□ 0.23
RIF1Q5UIP0 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.51■□□□□ 0.23
RIF1Q5UIP0 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RIF1Q5UIP0 BOLA2P3-201ENST00000404566 256 ntBASIC16.51■□□□□ 0.23
RIF1Q5UIP0 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.51■□□□□ 0.23
RIF1Q5UIP0 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.51■□□□□ 0.23
RIF1Q5UIP0 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.51■□□□□ 0.23
RIF1Q5UIP0 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.51■□□□□ 0.23
RIF1Q5UIP0 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.51■□□□□ 0.23
RIF1Q5UIP0 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC16.51■□□□□ 0.23
RIF1Q5UIP0 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.51■□□□□ 0.23
RIF1Q5UIP0 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.51■□□□□ 0.23
RIF1Q5UIP0 AC244093.1-201ENST00000610837 814 ntBASIC16.51■□□□□ 0.23
RIF1Q5UIP0 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.5■□□□□ 0.23
RIF1Q5UIP0 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RIF1Q5UIP0 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RIF1Q5UIP0 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RIF1Q5UIP0 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RIF1Q5UIP0 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.5■□□□□ 0.23
RIF1Q5UIP0 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RIF1Q5UIP0 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RIF1Q5UIP0 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RIF1Q5UIP0 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RIF1Q5UIP0 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RIF1Q5UIP0 CALR4P-201ENST00000431943 946 ntBASIC16.5■□□□□ 0.23
RIF1Q5UIP0 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.5■□□□□ 0.23
RIF1Q5UIP0 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RIF1Q5UIP0 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.5■□□□□ 0.23
RIF1Q5UIP0 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.5■□□□□ 0.23
RIF1Q5UIP0 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RIF1Q5UIP0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RIF1Q5UIP0 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RIF1Q5UIP0 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RIF1Q5UIP0 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
RIF1Q5UIP0 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC16.5■□□□□ 0.23
RIF1Q5UIP0 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.5■□□□□ 0.23
RIF1Q5UIP0 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.5■□□□□ 0.23
RIF1Q5UIP0 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.5■□□□□ 0.23
RIF1Q5UIP0 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RIF1Q5UIP0 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RIF1Q5UIP0 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.5■□□□□ 0.23
RIF1Q5UIP0 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.5■□□□□ 0.23
RIF1Q5UIP0 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RIF1Q5UIP0 MTND6P24-201ENST00000440466 518 ntBASIC16.5■□□□□ 0.23
RIF1Q5UIP0 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.5■□□□□ 0.23
RIF1Q5UIP0 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.5■□□□□ 0.23
RIF1Q5UIP0 AC055876.2-201ENST00000531834 546 ntBASIC16.5■□□□□ 0.23
RIF1Q5UIP0 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms