Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC026120.1-201ENST00000611536 926 ntBASIC14.05□□□□□ -0.16
LMO4P61968 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
LMO4P61968 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LMO4P61968 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.05□□□□□ -0.16
LMO4P61968 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LMO4P61968 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LMO4P61968 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LMO4P61968 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LMO4P61968 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
LMO4P61968 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LMO4P61968 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LMO4P61968 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.05□□□□□ -0.16
LMO4P61968 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC14.05□□□□□ -0.16
LMO4P61968 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LMO4P61968 AC012569.1-201ENST00000591191 1524 ntBASIC14.05□□□□□ -0.16
LMO4P61968 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
LMO4P61968 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LMO4P61968 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LMO4P61968 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.04□□□□□ -0.16
LMO4P61968 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC14.04□□□□□ -0.16
LMO4P61968 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.04□□□□□ -0.16
LMO4P61968 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LMO4P61968 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.04□□□□□ -0.16
LMO4P61968 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LMO4P61968 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC14.04□□□□□ -0.16
LMO4P61968 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LMO4P61968 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LMO4P61968 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LMO4P61968 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LMO4P61968 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LMO4P61968 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.04□□□□□ -0.16
LMO4P61968 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
LMO4P61968 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.04□□□□□ -0.16
LMO4P61968 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.04□□□□□ -0.16
LMO4P61968 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
LMO4P61968 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
LMO4P61968 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.04□□□□□ -0.16
LMO4P61968 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.04□□□□□ -0.16
LMO4P61968 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.04□□□□□ -0.16
LMO4P61968 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.04□□□□□ -0.16
LMO4P61968 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.04□□□□□ -0.16
LMO4P61968 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LMO4P61968 AL353732.1-201ENST00000569618 1459 ntBASIC14.04□□□□□ -0.16
LMO4P61968 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
LMO4P61968 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LMO4P61968 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.04□□□□□ -0.16
LMO4P61968 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LMO4P61968 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LMO4P61968 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LMO4P61968 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LMO4P61968 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
LMO4P61968 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.03□□□□□ -0.16
LMO4P61968 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LMO4P61968 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO4P61968 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO4P61968 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
LMO4P61968 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO4P61968 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO4P61968 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
LMO4P61968 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO4P61968 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO4P61968 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.03□□□□□ -0.16
LMO4P61968 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.03□□□□□ -0.16
LMO4P61968 TIMM8BP1-201ENST00000452384 211 ntBASIC14.03□□□□□ -0.16
LMO4P61968 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.03□□□□□ -0.16
LMO4P61968 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LMO4P61968 HLA-J-203ENST00000494367 1087 ntBASIC14.03□□□□□ -0.16
LMO4P61968 KRT8P48-201ENST00000515599 1220 ntBASIC14.03□□□□□ -0.16
LMO4P61968 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.03□□□□□ -0.16
LMO4P61968 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.03□□□□□ -0.16
LMO4P61968 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LMO4P61968 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.03□□□□□ -0.16
LMO4P61968 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.03□□□□□ -0.16
LMO4P61968 AC093028.1-201ENST00000622998 982 ntBASIC14.03□□□□□ -0.16
LMO4P61968 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO4P61968 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
LMO4P61968 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO4P61968 TOP3BP1-201ENST00000420768 1380 ntBASIC14.03□□□□□ -0.16
LMO4P61968 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LMO4P61968 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LMO4P61968 AC116353.5-201ENST00000638148 1699 ntBASIC14.03□□□□□ -0.16
LMO4P61968 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.03□□□□□ -0.16
LMO4P61968 GNAS-203ENST00000306120 1878 ntBASIC14.03□□□□□ -0.16
LMO4P61968 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LMO4P61968 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO4P61968 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO4P61968 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LMO4P61968 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO4P61968 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO4P61968 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC14.03□□□□□ -0.16
LMO4P61968 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC14.03□□□□□ -0.16
LMO4P61968 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO4P61968 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
LMO4P61968 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LMO4P61968 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.02□□□□□ -0.16
LMO4P61968 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LMO4P61968 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LMO4P61968 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
LMO4P61968 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
LMO4P61968 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms