Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17■□□□□ 0.31
SRP54P61011 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17■□□□□ 0.31
SRP54P61011 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17■□□□□ 0.31
SRP54P61011 AL133373.2-201ENST00000623187 2828 ntBASIC17■□□□□ 0.31
SRP54P61011 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SRP54P61011 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17■□□□□ 0.31
SRP54P61011 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SRP54P61011 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SRP54P61011 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.99■□□□□ 0.31
SRP54P61011 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.99■□□□□ 0.31
SRP54P61011 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SRP54P61011 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SRP54P61011 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SRP54P61011 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.99■□□□□ 0.31
SRP54P61011 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.99■□□□□ 0.31
SRP54P61011 RPSAP43-201ENST00000402237 625 ntBASIC16.99■□□□□ 0.31
SRP54P61011 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.99■□□□□ 0.31
SRP54P61011 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.99■□□□□ 0.31
SRP54P61011 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.99■□□□□ 0.31
SRP54P61011 GPX1P2-201ENST00000429271 606 ntBASIC16.99■□□□□ 0.31
SRP54P61011 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.99■□□□□ 0.31
SRP54P61011 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.99■□□□□ 0.31
SRP54P61011 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SRP54P61011 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SRP54P61011 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SRP54P61011 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SRP54P61011 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
SRP54P61011 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.99■□□□□ 0.31
SRP54P61011 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SRP54P61011 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SRP54P61011 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SRP54P61011 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SRP54P61011 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.98■□□□□ 0.31
SRP54P61011 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SRP54P61011 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SRP54P61011 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.98■□□□□ 0.31
SRP54P61011 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SRP54P61011 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SRP54P61011 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SRP54P61011 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SRP54P61011 AL390961.4-201ENST00000623958 2535 ntBASIC16.98■□□□□ 0.31
SRP54P61011 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SRP54P61011 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
SRP54P61011 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.98■□□□□ 0.31
SRP54P61011 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SRP54P61011 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SRP54P61011 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.98■□□□□ 0.31
SRP54P61011 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.98■□□□□ 0.31
SRP54P61011 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.98■□□□□ 0.31
SRP54P61011 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.98■□□□□ 0.31
SRP54P61011 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.98■□□□□ 0.31
SRP54P61011 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.98■□□□□ 0.31
SRP54P61011 AC112482.1-201ENST00000492080 688 ntBASIC16.98■□□□□ 0.31
SRP54P61011 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.98■□□□□ 0.31
SRP54P61011 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.98■□□□□ 0.31
SRP54P61011 AC018845.2-201ENST00000568326 409 ntBASIC16.98■□□□□ 0.31
SRP54P61011 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.98■□□□□ 0.31
SRP54P61011 MTDHP5-201ENST00000598980 586 ntBASIC16.98■□□□□ 0.31
SRP54P61011 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.98■□□□□ 0.31
SRP54P61011 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
SRP54P61011 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
SRP54P61011 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SRP54P61011 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SRP54P61011 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.98■□□□□ 0.31
SRP54P61011 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
SRP54P61011 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SRP54P61011 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SRP54P61011 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SRP54P61011 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SRP54P61011 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SRP54P61011 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SRP54P61011 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRP54P61011 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.97■□□□□ 0.31
SRP54P61011 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRP54P61011 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRP54P61011 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.97■□□□□ 0.31
SRP54P61011 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRP54P61011 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SRP54P61011 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SRP54P61011 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRP54P61011 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.97■□□□□ 0.31
SRP54P61011 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SRP54P61011 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRP54P61011 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SRP54P61011 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRP54P61011 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SRP54P61011 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRP54P61011 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.97■□□□□ 0.31
SRP54P61011 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.97■□□□□ 0.31
SRP54P61011 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRP54P61011 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.97■□□□□ 0.31
SRP54P61011 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SRP54P61011 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SRP54P61011 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.97■□□□□ 0.31
SRP54P61011 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SRP54P61011 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRP54P61011 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.97■□□□□ 0.31
SRP54P61011 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SRP54P61011 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRP54P61011 LYSMD4-203ENST00000378904 2122 ntBASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms