Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.95■□□□□ 0.3
CLDN2P57739 AC026471.1-201ENST00000564629 3026 ntBASIC16.95■□□□□ 0.3
CLDN2P57739 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN2P57739 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.95■□□□□ 0.3
CLDN2P57739 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN2P57739 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN2P57739 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN2P57739 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN2P57739 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN2P57739 AC067852.2-201ENST00000590513 2313 ntBASIC16.95■□□□□ 0.3
CLDN2P57739 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN2P57739 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN2P57739 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.94■□□□□ 0.3
CLDN2P57739 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN2P57739 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN2P57739 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN2P57739 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CLDN2P57739 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
CLDN2P57739 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN2P57739 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CLDN2P57739 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
CLDN2P57739 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN2P57739 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CLDN2P57739 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN2P57739 AC254562.1-201ENST00000417586 456 ntBASIC16.94■□□□□ 0.3
CLDN2P57739 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CLDN2P57739 CNN2P11-201ENST00000429351 262 ntBASIC16.94■□□□□ 0.3
CLDN2P57739 METTL21AP1-201ENST00000438852 635 ntBASIC16.94■□□□□ 0.3
CLDN2P57739 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CLDN2P57739 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
CLDN2P57739 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.94■□□□□ 0.3
CLDN2P57739 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.94■□□□□ 0.3
CLDN2P57739 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.94■□□□□ 0.3
CLDN2P57739 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN2P57739 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN2P57739 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN2P57739 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.94■□□□□ 0.3
CLDN2P57739 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CLDN2P57739 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CLDN2P57739 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN2P57739 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.94■□□□□ 0.3
CLDN2P57739 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN2P57739 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN2P57739 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN2P57739 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CLDN2P57739 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN2P57739 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CLDN2P57739 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN2P57739 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.93■□□□□ 0.3
CLDN2P57739 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.93■□□□□ 0.3
CLDN2P57739 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN2P57739 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN2P57739 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.93■□□□□ 0.3
CLDN2P57739 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CLDN2P57739 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN2P57739 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN2P57739 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN2P57739 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN2P57739 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.93■□□□□ 0.3
CLDN2P57739 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN2P57739 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.93■□□□□ 0.3
CLDN2P57739 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.93■□□□□ 0.3
CLDN2P57739 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.93■□□□□ 0.3
CLDN2P57739 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CLDN2P57739 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.93■□□□□ 0.3
CLDN2P57739 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CLDN2P57739 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.93■□□□□ 0.3
CLDN2P57739 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.93■□□□□ 0.3
CLDN2P57739 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CLDN2P57739 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CLDN2P57739 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.93■□□□□ 0.3
CLDN2P57739 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.93■□□□□ 0.3
CLDN2P57739 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.93■□□□□ 0.3
CLDN2P57739 AC068137.2-201ENST00000605408 478 ntBASIC16.93■□□□□ 0.3
CLDN2P57739 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.93■□□□□ 0.3
CLDN2P57739 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN2P57739 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN2P57739 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN2P57739 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN2P57739 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.93■□□□□ 0.3
CLDN2P57739 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CLDN2P57739 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN2P57739 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.93■□□□□ 0.3
CLDN2P57739 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN2P57739 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN2P57739 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN2P57739 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
CLDN2P57739 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN2P57739 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.92■□□□□ 0.3
CLDN2P57739 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN2P57739 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN2P57739 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN2P57739 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.92■□□□□ 0.3
CLDN2P57739 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.92■□□□□ 0.3
CLDN2P57739 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.92■□□□□ 0.3
CLDN2P57739 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.92■□□□□ 0.3
CLDN2P57739 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN2P57739 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN2P57739 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
CLDN2P57739 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms