Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.49■□□□□ 0.23
CLDN6P56747 RN7SL204P-201ENST00000582831 262 ntBASIC16.49■□□□□ 0.23
CLDN6P56747 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.49■□□□□ 0.23
CLDN6P56747 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.49■□□□□ 0.23
CLDN6P56747 AC138649.4-201ENST00000612222 287 ntBASIC16.49■□□□□ 0.23
CLDN6P56747 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.49■□□□□ 0.23
CLDN6P56747 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.49■□□□□ 0.23
CLDN6P56747 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN6P56747 AC007613.1-201ENST00000572811 2597 ntBASIC16.49■□□□□ 0.23
CLDN6P56747 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN6P56747 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN6P56747 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN6P56747 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN6P56747 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN6P56747 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.49■□□□□ 0.23
CLDN6P56747 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.49■□□□□ 0.23
CLDN6P56747 HTR7P1-202ENST00000624664 4411 ntBASIC16.49■□□□□ 0.23
CLDN6P56747 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN6P56747 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.49■□□□□ 0.23
CLDN6P56747 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.49■□□□□ 0.23
CLDN6P56747 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.49■□□□□ 0.23
CLDN6P56747 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.48■□□□□ 0.23
CLDN6P56747 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN6P56747 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CLDN6P56747 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN6P56747 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.48■□□□□ 0.23
CLDN6P56747 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN6P56747 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.48■□□□□ 0.23
CLDN6P56747 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN6P56747 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.48■□□□□ 0.23
CLDN6P56747 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN6P56747 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CLDN6P56747 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN6P56747 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CLDN6P56747 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN6P56747 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN6P56747 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN6P56747 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.48■□□□□ 0.23
CLDN6P56747 AC135050.7-201ENST00000624508 2218 ntBASIC16.48■□□□□ 0.23
CLDN6P56747 AC002056.1-201ENST00000395613 760 ntBASIC16.48■□□□□ 0.23
CLDN6P56747 KRT18P32-201ENST00000424695 1287 ntBASIC16.48■□□□□ 0.23
CLDN6P56747 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.48■□□□□ 0.23
CLDN6P56747 AC002558.1-201ENST00000488906 803 ntBASIC16.48■□□□□ 0.23
CLDN6P56747 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.48■□□□□ 0.23
CLDN6P56747 RNA5SP421-201ENST00000516864 134 ntBASIC16.48■□□□□ 0.23
CLDN6P56747 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
CLDN6P56747 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.48■□□□□ 0.23
CLDN6P56747 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.48■□□□□ 0.23
CLDN6P56747 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CLDN6P56747 AL135999.2-201ENST00000622438 1686 ntBASIC16.48■□□□□ 0.23
CLDN6P56747 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.48■□□□□ 0.23
CLDN6P56747 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN6P56747 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN6P56747 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN6P56747 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.48■□□□□ 0.23
CLDN6P56747 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CLDN6P56747 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN6P56747 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN6P56747 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN6P56747 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN6P56747 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.47■□□□□ 0.23
CLDN6P56747 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CLDN6P56747 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
CLDN6P56747 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.47■□□□□ 0.23
CLDN6P56747 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN6P56747 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDN6P56747 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDN6P56747 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN6P56747 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.47■□□□□ 0.23
CLDN6P56747 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.47■□□□□ 0.23
CLDN6P56747 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN6P56747 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN6P56747 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN6P56747 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN6P56747 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.47■□□□□ 0.23
CLDN6P56747 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN6P56747 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDN6P56747 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN6P56747 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN6P56747 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN6P56747 ACTG1P4-201ENST00000425123 1122 ntBASIC16.47■□□□□ 0.23
CLDN6P56747 TSPY16P-201ENST00000449843 468 ntBASIC16.47■□□□□ 0.23
CLDN6P56747 AC087163.2-201ENST00000457299 853 ntBASIC16.47■□□□□ 0.23
CLDN6P56747 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.47■□□□□ 0.23
CLDN6P56747 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDN6P56747 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.47■□□□□ 0.23
CLDN6P56747 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDN6P56747 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN6P56747 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.47■□□□□ 0.23
CLDN6P56747 AC012645.4-201ENST00000610691 1061 ntBASIC16.47■□□□□ 0.23
CLDN6P56747 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.47■□□□□ 0.23
CLDN6P56747 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.47■□□□□ 0.23
CLDN6P56747 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.47■□□□□ 0.23
CLDN6P56747 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.47■□□□□ 0.23
CLDN6P56747 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN6P56747 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CLDN6P56747 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN6P56747 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CLDN6P56747 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN6P56747 FO538757.1-201ENST00000623083 1397 ntBASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms