Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC12.62□□□□□ -0.39
APOC4P55056 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC4P55056 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOC4P55056 LYSMD4-203ENST00000378904 2122 ntBASIC12.62□□□□□ -0.39
APOC4P55056 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOC4P55056 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC12.62□□□□□ -0.39
APOC4P55056 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
APOC4P55056 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOC4P55056 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
APOC4P55056 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOC4P55056 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOC4P55056 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC4P55056 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOC4P55056 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC4P55056 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
APOC4P55056 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
APOC4P55056 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC12.61□□□□□ -0.39
APOC4P55056 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
APOC4P55056 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
APOC4P55056 GATB-213ENST00000515812 1893 ntTSL 5 BASIC12.61□□□□□ -0.39
APOC4P55056 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC12.61□□□□□ -0.39
APOC4P55056 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOC4P55056 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOC4P55056 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
APOC4P55056 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC12.61□□□□□ -0.39
APOC4P55056 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
APOC4P55056 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOC4P55056 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
APOC4P55056 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOC4P55056 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
APOC4P55056 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC12.61□□□□□ -0.39
APOC4P55056 AC002310.6-201ENST00000624451 1377 ntBASIC12.61□□□□□ -0.39
APOC4P55056 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOC4P55056 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
APOC4P55056 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
APOC4P55056 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
APOC4P55056 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC12.61□□□□□ -0.39
APOC4P55056 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
APOC4P55056 HNRNPA1P28-201ENST00000424481 961 ntBASIC12.61□□□□□ -0.39
APOC4P55056 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC12.61□□□□□ -0.39
APOC4P55056 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC12.61□□□□□ -0.39
APOC4P55056 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOC4P55056 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC12.61□□□□□ -0.39
APOC4P55056 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC12.61□□□□□ -0.39
APOC4P55056 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC12.61□□□□□ -0.39
APOC4P55056 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC12.61□□□□□ -0.39
APOC4P55056 AC004790.2-201ENST00000623588 572 ntBASIC12.61□□□□□ -0.39
APOC4P55056 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC12.61□□□□□ -0.39
APOC4P55056 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
APOC4P55056 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
APOC4P55056 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOC4P55056 AL355312.1-201ENST00000407115 2176 ntBASIC12.61□□□□□ -0.39
APOC4P55056 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOC4P55056 GNAS-203ENST00000306120 1878 ntBASIC12.61□□□□□ -0.39
APOC4P55056 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
APOC4P55056 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
APOC4P55056 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOC4P55056 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOC4P55056 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
APOC4P55056 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOC4P55056 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
APOC4P55056 AL590787.1-201ENST00000568856 1315 ntBASIC12.61□□□□□ -0.39
APOC4P55056 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOC4P55056 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOC4P55056 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC12.6□□□□□ -0.39
APOC4P55056 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOC4P55056 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOC4P55056 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOC4P55056 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOC4P55056 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOC4P55056 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
APOC4P55056 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC12.6□□□□□ -0.39
APOC4P55056 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOC4P55056 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
APOC4P55056 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOC4P55056 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOC4P55056 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC12.6□□□□□ -0.39
APOC4P55056 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOC4P55056 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
APOC4P55056 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC12.6□□□□□ -0.39
APOC4P55056 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC12.6□□□□□ -0.39
APOC4P55056 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC12.6□□□□□ -0.39
APOC4P55056 NMU-202ENST00000505262 693 ntTSL 3 BASIC12.6□□□□□ -0.39
APOC4P55056 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC12.6□□□□□ -0.39
APOC4P55056 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
APOC4P55056 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC12.6□□□□□ -0.39
APOC4P55056 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC12.6□□□□□ -0.39
APOC4P55056 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOC4P55056 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC12.6□□□□□ -0.39
APOC4P55056 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC12.6□□□□□ -0.39
APOC4P55056 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC12.6□□□□□ -0.39
APOC4P55056 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
APOC4P55056 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOC4P55056 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
APOC4P55056 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
APOC4P55056 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOC4P55056 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOC4P55056 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
APOC4P55056 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOC4P55056 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms