Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
LIMK2P53671 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
LIMK2P53671 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LIMK2P53671 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.38■□□□□ 0.37
LIMK2P53671 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.38■□□□□ 0.37
LIMK2P53671 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LIMK2P53671 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
LIMK2P53671 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.37■□□□□ 0.37
LIMK2P53671 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LIMK2P53671 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LIMK2P53671 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.37■□□□□ 0.37
LIMK2P53671 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
LIMK2P53671 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
LIMK2P53671 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LIMK2P53671 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.37■□□□□ 0.37
LIMK2P53671 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LIMK2P53671 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LIMK2P53671 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LIMK2P53671 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.37■□□□□ 0.37
LIMK2P53671 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.37■□□□□ 0.37
LIMK2P53671 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.37■□□□□ 0.37
LIMK2P53671 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.37■□□□□ 0.37
LIMK2P53671 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.37■□□□□ 0.37
LIMK2P53671 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.37■□□□□ 0.37
LIMK2P53671 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
LIMK2P53671 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
LIMK2P53671 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.37■□□□□ 0.37
LIMK2P53671 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
LIMK2P53671 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.37■□□□□ 0.37
LIMK2P53671 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.37■□□□□ 0.37
LIMK2P53671 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.37■□□□□ 0.37
LIMK2P53671 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.37■□□□□ 0.37
LIMK2P53671 AL138831.2-201ENST00000606564 490 ntBASIC17.37■□□□□ 0.37
LIMK2P53671 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LIMK2P53671 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.37■□□□□ 0.37
LIMK2P53671 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.37■□□□□ 0.37
LIMK2P53671 HLA-A-201ENST00000376802 1334 ntBASIC17.37■□□□□ 0.37
LIMK2P53671 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
LIMK2P53671 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
LIMK2P53671 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
LIMK2P53671 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LIMK2P53671 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
LIMK2P53671 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.37■□□□□ 0.37
LIMK2P53671 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LIMK2P53671 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LIMK2P53671 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LIMK2P53671 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LIMK2P53671 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LIMK2P53671 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LIMK2P53671 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LIMK2P53671 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LIMK2P53671 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LIMK2P53671 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LIMK2P53671 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LIMK2P53671 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LIMK2P53671 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LIMK2P53671 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LIMK2P53671 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.36■□□□□ 0.37
LIMK2P53671 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LIMK2P53671 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LIMK2P53671 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LIMK2P53671 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LIMK2P53671 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LIMK2P53671 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LIMK2P53671 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LIMK2P53671 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.36■□□□□ 0.37
LIMK2P53671 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
LIMK2P53671 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.36■□□□□ 0.37
LIMK2P53671 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.36■□□□□ 0.37
LIMK2P53671 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LIMK2P53671 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
LIMK2P53671 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.36■□□□□ 0.37
LIMK2P53671 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.36■□□□□ 0.37
LIMK2P53671 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LIMK2P53671 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
LIMK2P53671 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LIMK2P53671 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LIMK2P53671 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LIMK2P53671 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LIMK2P53671 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
LIMK2P53671 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LIMK2P53671 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
LIMK2P53671 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.36■□□□□ 0.37
LIMK2P53671 AL049757.1-201ENST00000616842 1596 ntBASIC17.36■□□□□ 0.37
LIMK2P53671 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LIMK2P53671 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LIMK2P53671 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
LIMK2P53671 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
LIMK2P53671 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.36■□□□□ 0.37
LIMK2P53671 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LIMK2P53671 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LIMK2P53671 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LIMK2P53671 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
LIMK2P53671 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LIMK2P53671 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LIMK2P53671 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LIMK2P53671 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LIMK2P53671 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LIMK2P53671 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.35■□□□□ 0.37
LIMK2P53671 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms