Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.18■□□□□ 0.18
SMSP52788 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.18■□□□□ 0.18
SMSP52788 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.18■□□□□ 0.18
SMSP52788 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SMSP52788 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.18■□□□□ 0.18
SMSP52788 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SMSP52788 BNIP3P18-201ENST00000593976 575 ntBASIC16.18■□□□□ 0.18
SMSP52788 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SMSP52788 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SMSP52788 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SMSP52788 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
SMSP52788 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMSP52788 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMSP52788 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SMSP52788 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SMSP52788 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMSP52788 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMSP52788 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.18■□□□□ 0.18
SMSP52788 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMSP52788 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMSP52788 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMSP52788 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMSP52788 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMSP52788 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMSP52788 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMSP52788 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SMSP52788 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.17■□□□□ 0.18
SMSP52788 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SMSP52788 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SMSP52788 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
SMSP52788 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.17■□□□□ 0.18
SMSP52788 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMSP52788 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SMSP52788 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMSP52788 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SMSP52788 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMSP52788 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMSP52788 ZNF259P1-201ENST00000407656 1365 ntBASIC16.17■□□□□ 0.18
SMSP52788 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMSP52788 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMSP52788 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMSP52788 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMSP52788 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.17■□□□□ 0.18
SMSP52788 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
SMSP52788 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SMSP52788 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.17■□□□□ 0.18
SMSP52788 SCARNA2-201ENST00000458748 420 ntBASIC16.17■□□□□ 0.18
SMSP52788 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.17■□□□□ 0.18
SMSP52788 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SMSP52788 AC091607.1-201ENST00000490318 1060 ntBASIC16.17■□□□□ 0.18
SMSP52788 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.17■□□□□ 0.18
SMSP52788 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMSP52788 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.17■□□□□ 0.18
SMSP52788 TERC-201ENST00000602385 541 ntBASIC16.17■□□□□ 0.18
SMSP52788 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.17■□□□□ 0.18
SMSP52788 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.17■□□□□ 0.18
SMSP52788 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SMSP52788 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.17■□□□□ 0.18
SMSP52788 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMSP52788 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
SMSP52788 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.17■□□□□ 0.18
SMSP52788 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.17■□□□□ 0.18
SMSP52788 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMSP52788 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.17■□□□□ 0.18
SMSP52788 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.17■□□□□ 0.18
SMSP52788 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.17■□□□□ 0.18
SMSP52788 AC009949.1-201ENST00000623048 1830 ntBASIC16.17■□□□□ 0.18
SMSP52788 PMS2P7-201ENST00000506558 1336 ntBASIC16.17■□□□□ 0.18
SMSP52788 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.17■□□□□ 0.18
SMSP52788 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SMSP52788 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SMSP52788 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SMSP52788 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.16■□□□□ 0.18
SMSP52788 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.16■□□□□ 0.18
SMSP52788 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMSP52788 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMSP52788 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMSP52788 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SMSP52788 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMSP52788 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SMSP52788 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMSP52788 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.16■□□□□ 0.18
SMSP52788 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMSP52788 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SMSP52788 DDX43P3-201ENST00000441064 443 ntBASIC16.16■□□□□ 0.18
SMSP52788 AC132008.2-207ENST00000454517 770 ntBASIC16.16■□□□□ 0.18
SMSP52788 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.16■□□□□ 0.18
SMSP52788 RNA5SP419-201ENST00000515908 135 ntBASIC16.16■□□□□ 0.18
SMSP52788 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.16■□□□□ 0.18
SMSP52788 AC106730.1-201ENST00000566722 1090 ntBASIC16.16■□□□□ 0.18
SMSP52788 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.16■□□□□ 0.18
SMSP52788 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.16■□□□□ 0.18
SMSP52788 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.16■□□□□ 0.18
SMSP52788 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.16■□□□□ 0.18
SMSP52788 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SMSP52788 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
SMSP52788 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.16■□□□□ 0.18
SMSP52788 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMSP52788 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMSP52788 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms