Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 AL133215.2-201ENST00000609242 977 ntBASIC30.35■■■□□ 2.45
SMARCA4P51532 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC30.35■■■□□ 2.45
SMARCA4P51532 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
SMARCA4P51532 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC30.34■■■□□ 2.45
SMARCA4P51532 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC30.34■■■□□ 2.45
SMARCA4P51532 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC30.34■■■□□ 2.45
SMARCA4P51532 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC30.34■■■□□ 2.45
SMARCA4P51532 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC30.34■■■□□ 2.45
SMARCA4P51532 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC30.34■■■□□ 2.45
SMARCA4P51532 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC30.34■■■□□ 2.45
SMARCA4P51532 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC30.34■■■□□ 2.45
SMARCA4P51532 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC30.33■■■□□ 2.45
SMARCA4P51532 RPL37AP1-201ENST00000412502 279 ntBASIC30.33■■■□□ 2.45
SMARCA4P51532 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC30.33■■■□□ 2.45
SMARCA4P51532 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC30.33■■■□□ 2.45
SMARCA4P51532 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
SMARCA4P51532 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC30.33■■■□□ 2.45
SMARCA4P51532 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC30.33■■■□□ 2.45
SMARCA4P51532 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC30.33■■■□□ 2.45
SMARCA4P51532 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
SMARCA4P51532 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC30.33■■■□□ 2.45
SMARCA4P51532 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC30.33■■■□□ 2.45
SMARCA4P51532 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC30.33■■■□□ 2.45
SMARCA4P51532 PTPA-220ENST00000436883 532 ntTSL 4 BASIC30.33■■■□□ 2.45
SMARCA4P51532 SPDYE18-201ENST00000510091 1050 ntBASIC30.33■■■□□ 2.45
SMARCA4P51532 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC30.33■■■□□ 2.45
SMARCA4P51532 POLE2-203ENST00000553805 496 ntTSL 2 BASIC30.33■■■□□ 2.45
SMARCA4P51532 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC30.33■■■□□ 2.45
SMARCA4P51532 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
SMARCA4P51532 AL606495.2-201ENST00000605867 535 ntBASIC30.33■■■□□ 2.45
SMARCA4P51532 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC30.33■■■□□ 2.45
SMARCA4P51532 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC30.32■■■□□ 2.44
SMARCA4P51532 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC30.32■■■□□ 2.44
SMARCA4P51532 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
SMARCA4P51532 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
SMARCA4P51532 CETN4P-206ENST00000642099 2168 ntBASIC30.32■■■□□ 2.44
SMARCA4P51532 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC30.32■■■□□ 2.44
SMARCA4P51532 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
SMARCA4P51532 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC30.32■■■□□ 2.44
SMARCA4P51532 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC30.32■■■□□ 2.44
SMARCA4P51532 CENPM-206ENST00000407253 818 ntTSL 2 BASIC30.32■■■□□ 2.44
SMARCA4P51532 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC30.32■■■□□ 2.44
SMARCA4P51532 AC021097.1-201ENST00000607902 574 ntBASIC30.32■■■□□ 2.44
SMARCA4P51532 AL035456.1-201ENST00000456064 1369 ntBASIC30.32■■■□□ 2.44
SMARCA4P51532 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC30.32■■■□□ 2.44
SMARCA4P51532 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC30.32■■■□□ 2.44
SMARCA4P51532 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
SMARCA4P51532 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC30.32■■■□□ 2.44
SMARCA4P51532 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
SMARCA4P51532 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC30.31■■■□□ 2.44
SMARCA4P51532 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC30.31■■■□□ 2.44
SMARCA4P51532 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
SMARCA4P51532 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SMARCA4P51532 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC30.31■■■□□ 2.44
SMARCA4P51532 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SMARCA4P51532 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
SMARCA4P51532 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
SMARCA4P51532 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC30.31■■■□□ 2.44
SMARCA4P51532 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SMARCA4P51532 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC30.31■■■□□ 2.44
SMARCA4P51532 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC30.31■■■□□ 2.44
SMARCA4P51532 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
SMARCA4P51532 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC30.31■■■□□ 2.44
SMARCA4P51532 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC30.31■■■□□ 2.44
SMARCA4P51532 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC30.31■■■□□ 2.44
SMARCA4P51532 ARL16-202ENST00000570561 768 ntTSL 2 BASIC30.31■■■□□ 2.44
SMARCA4P51532 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SMARCA4P51532 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
SMARCA4P51532 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC30.31■■■□□ 2.44
SMARCA4P51532 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC30.31■■■□□ 2.44
SMARCA4P51532 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC30.31■■■□□ 2.44
SMARCA4P51532 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
SMARCA4P51532 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC30.3■■■□□ 2.44
SMARCA4P51532 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC30.3■■■□□ 2.44
SMARCA4P51532 STARD13-205ENST00000439831 945 ntTSL 2 BASIC30.3■■■□□ 2.44
SMARCA4P51532 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC30.3■■■□□ 2.44
SMARCA4P51532 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
SMARCA4P51532 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC30.3■■■□□ 2.44
SMARCA4P51532 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC30.3■■■□□ 2.44
SMARCA4P51532 FOS-208ENST00000555686 1496 ntTSL 2 BASIC30.3■■■□□ 2.44
SMARCA4P51532 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
SMARCA4P51532 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
SMARCA4P51532 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC30.29■■■□□ 2.44
SMARCA4P51532 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC30.29■■■□□ 2.44
SMARCA4P51532 DGCR5-201ENST00000399539 862 ntBASIC30.29■■■□□ 2.44
SMARCA4P51532 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC30.29■■■□□ 2.44
SMARCA4P51532 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC30.29■■■□□ 2.44
SMARCA4P51532 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC30.29■■■□□ 2.44
SMARCA4P51532 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC30.29■■■□□ 2.44
SMARCA4P51532 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
SMARCA4P51532 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC30.29■■■□□ 2.44
SMARCA4P51532 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC30.29■■■□□ 2.44
SMARCA4P51532 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC30.29■■■□□ 2.44
SMARCA4P51532 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC30.29■■■□□ 2.44
SMARCA4P51532 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
SMARCA4P51532 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
SMARCA4P51532 AC090164.3-201ENST00000610780 2143 ntBASIC30.29■■■□□ 2.44
SMARCA4P51532 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
SMARCA4P51532 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
SMARCA4P51532 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC30.29■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms