Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
CSNK1DP48730 AC107918.2-201ENST00000530817 355 ntBASIC17.2■□□□□ 0.34
CSNK1DP48730 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.2■□□□□ 0.34
CSNK1DP48730 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1DP48730 AC096734.2-201ENST00000562054 433 ntBASIC17.2■□□□□ 0.34
CSNK1DP48730 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.2■□□□□ 0.34
CSNK1DP48730 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1DP48730 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.2■□□□□ 0.34
CSNK1DP48730 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1DP48730 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.2■□□□□ 0.34
CSNK1DP48730 AC108860.2-201ENST00000562760 2183 ntBASIC17.2■□□□□ 0.34
CSNK1DP48730 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1DP48730 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.2■□□□□ 0.34
CSNK1DP48730 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1DP48730 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1DP48730 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CSNK1DP48730 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.2■□□□□ 0.34
CSNK1DP48730 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1DP48730 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CSNK1DP48730 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1DP48730 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1DP48730 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1DP48730 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.19■□□□□ 0.34
CSNK1DP48730 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CSNK1DP48730 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1DP48730 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1DP48730 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1DP48730 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
CSNK1DP48730 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1DP48730 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.19■□□□□ 0.34
CSNK1DP48730 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1DP48730 TOP3BP1-201ENST00000420768 1380 ntBASIC17.19■□□□□ 0.34
CSNK1DP48730 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CSNK1DP48730 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1DP48730 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.19■□□□□ 0.34
CSNK1DP48730 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1DP48730 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.19■□□□□ 0.34
CSNK1DP48730 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1DP48730 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.19■□□□□ 0.34
CSNK1DP48730 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CSNK1DP48730 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.19■□□□□ 0.34
CSNK1DP48730 RHOQP3-201ENST00000437982 621 ntBASIC17.19■□□□□ 0.34
CSNK1DP48730 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.19■□□□□ 0.34
CSNK1DP48730 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.19■□□□□ 0.34
CSNK1DP48730 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.19■□□□□ 0.34
CSNK1DP48730 CXCL1P1-201ENST00000502804 216 ntBASIC17.19■□□□□ 0.34
CSNK1DP48730 RNA5SP416-201ENST00000516838 111 ntBASIC17.19■□□□□ 0.34
CSNK1DP48730 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1DP48730 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.19■□□□□ 0.34
CSNK1DP48730 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.19■□□□□ 0.34
CSNK1DP48730 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CSNK1DP48730 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1DP48730 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.19■□□□□ 0.34
CSNK1DP48730 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.19■□□□□ 0.34
CSNK1DP48730 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.19■□□□□ 0.34
CSNK1DP48730 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1DP48730 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1DP48730 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.19■□□□□ 0.34
CSNK1DP48730 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.19■□□□□ 0.34
CSNK1DP48730 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1DP48730 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1DP48730 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.19■□□□□ 0.34
CSNK1DP48730 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.19■□□□□ 0.34
CSNK1DP48730 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1DP48730 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CSNK1DP48730 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CSNK1DP48730 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSNK1DP48730 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CSNK1DP48730 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSNK1DP48730 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CSNK1DP48730 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CSNK1DP48730 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSNK1DP48730 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSNK1DP48730 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CSNK1DP48730 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.18■□□□□ 0.34
CSNK1DP48730 AC092053.1-201ENST00000605787 1936 ntBASIC17.18■□□□□ 0.34
CSNK1DP48730 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CSNK1DP48730 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.18■□□□□ 0.34
CSNK1DP48730 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSNK1DP48730 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSNK1DP48730 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CSNK1DP48730 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSNK1DP48730 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.18■□□□□ 0.34
CSNK1DP48730 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.18■□□□□ 0.34
CSNK1DP48730 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.18■□□□□ 0.34
CSNK1DP48730 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.18■□□□□ 0.34
CSNK1DP48730 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.18■□□□□ 0.34
CSNK1DP48730 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CSNK1DP48730 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.18■□□□□ 0.34
CSNK1DP48730 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.18■□□□□ 0.34
CSNK1DP48730 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CSNK1DP48730 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSNK1DP48730 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSNK1DP48730 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.18■□□□□ 0.34
CSNK1DP48730 TUBB8P12-201ENST00000308911 1335 ntBASIC17.18■□□□□ 0.34
CSNK1DP48730 TUBB7P-202ENST00000428444 1305 ntBASIC17.18■□□□□ 0.34
CSNK1DP48730 TUBB8P7-204ENST00000567960 1332 ntBASIC17.18■□□□□ 0.34
CSNK1DP48730 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CSNK1DP48730 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CSNK1DP48730 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms