Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.86■□□□□ 0.61
KRT9P35527 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.86■□□□□ 0.61
KRT9P35527 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT9P35527 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT9P35527 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT9P35527 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT9P35527 ARMC10P1-201ENST00000313754 855 ntBASIC18.86■□□□□ 0.61
KRT9P35527 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.86■□□□□ 0.61
KRT9P35527 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KRT9P35527 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT9P35527 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.86■□□□□ 0.61
KRT9P35527 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.86■□□□□ 0.61
KRT9P35527 AC109462.3-201ENST00000573934 613 ntBASIC18.86■□□□□ 0.61
KRT9P35527 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT9P35527 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.86■□□□□ 0.61
KRT9P35527 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT9P35527 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT9P35527 DOC2GP-204ENST00000639052 2548 ntBASIC18.86■□□□□ 0.61
KRT9P35527 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT9P35527 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
KRT9P35527 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KRT9P35527 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.86■□□□□ 0.61
KRT9P35527 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KRT9P35527 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
KRT9P35527 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT9P35527 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KRT9P35527 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT9P35527 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT9P35527 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
KRT9P35527 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
KRT9P35527 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT9P35527 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KRT9P35527 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KRT9P35527 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.86■□□□□ 0.61
KRT9P35527 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT9P35527 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.85■□□□□ 0.61
KRT9P35527 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KRT9P35527 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT9P35527 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
KRT9P35527 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KRT9P35527 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT9P35527 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
KRT9P35527 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
KRT9P35527 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.85■□□□□ 0.61
KRT9P35527 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KRT9P35527 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
KRT9P35527 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KRT9P35527 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
KRT9P35527 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
KRT9P35527 MIR1224-201ENST00000408193 85 ntBASIC18.85■□□□□ 0.61
KRT9P35527 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.85■□□□□ 0.61
KRT9P35527 IGHV3-52-201ENST00000519770 353 ntBASIC18.85■□□□□ 0.61
KRT9P35527 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.85■□□□□ 0.61
KRT9P35527 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.85■□□□□ 0.61
KRT9P35527 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.85■□□□□ 0.61
KRT9P35527 AP000550.4-202ENST00000639755 178 ntBASIC18.85■□□□□ 0.61
KRT9P35527 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT9P35527 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT9P35527 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT9P35527 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT9P35527 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT9P35527 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.85■□□□□ 0.61
KRT9P35527 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.85■□□□□ 0.61
KRT9P35527 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT9P35527 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT9P35527 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT9P35527 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT9P35527 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT9P35527 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.84■□□□□ 0.61
KRT9P35527 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT9P35527 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.84■□□□□ 0.61
KRT9P35527 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT9P35527 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
KRT9P35527 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
KRT9P35527 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT9P35527 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.84■□□□□ 0.61
KRT9P35527 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT9P35527 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.84■□□□□ 0.61
KRT9P35527 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
KRT9P35527 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
KRT9P35527 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT9P35527 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT9P35527 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.84■□□□□ 0.61
KRT9P35527 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT9P35527 TSSC2-201ENST00000450217 709 ntBASIC18.84■□□□□ 0.61
KRT9P35527 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT9P35527 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.84■□□□□ 0.61
KRT9P35527 AL445228.2-201ENST00000605589 952 ntBASIC18.84■□□□□ 0.61
KRT9P35527 AL353801.3-201ENST00000609898 542 ntBASIC18.84■□□□□ 0.61
KRT9P35527 AC010331.1-201ENST00000611423 582 ntBASIC18.84■□□□□ 0.61
KRT9P35527 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT9P35527 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT9P35527 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT9P35527 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
KRT9P35527 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
KRT9P35527 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT9P35527 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT9P35527 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
KRT9P35527 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT9P35527 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms