Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHC1P29353 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SHC1P29353 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHC1P29353 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHC1P29353 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
SHC1P29353 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SHC1P29353 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SHC1P29353 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHC1P29353 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SHC1P29353 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SHC1P29353 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHC1P29353 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHC1P29353 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SHC1P29353 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
SHC1P29353 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SHC1P29353 AC002558.1-201ENST00000488906 803 ntBASIC15.81■□□□□ 0.12
SHC1P29353 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.81■□□□□ 0.12
SHC1P29353 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
SHC1P29353 AF238378.1-201ENST00000526806 358 ntBASIC15.81■□□□□ 0.12
SHC1P29353 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.81■□□□□ 0.12
SHC1P29353 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.81■□□□□ 0.12
SHC1P29353 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.81■□□□□ 0.12
SHC1P29353 RN7SL510P-201ENST00000581311 263 ntBASIC15.81■□□□□ 0.12
SHC1P29353 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.81■□□□□ 0.12
SHC1P29353 AL353593.2-201ENST00000602529 1483 ntBASIC15.81■□□□□ 0.12
SHC1P29353 AL121894.2-201ENST00000602977 491 ntBASIC15.81■□□□□ 0.12
SHC1P29353 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SHC1P29353 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHC1P29353 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SHC1P29353 AL691432.3-201ENST00000621860 400 ntBASIC15.81■□□□□ 0.12
SHC1P29353 LINC01451-201ENST00000623792 534 ntBASIC15.81■□□□□ 0.12
SHC1P29353 AC132938.5-201ENST00000624980 1813 ntBASIC15.81■□□□□ 0.12
SHC1P29353 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SHC1P29353 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.81■□□□□ 0.12
SHC1P29353 AP000867.4-201ENST00000641616 219 ntBASIC15.81■□□□□ 0.12
SHC1P29353 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SHC1P29353 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
SHC1P29353 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SHC1P29353 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SHC1P29353 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SHC1P29353 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.81■□□□□ 0.12
SHC1P29353 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHC1P29353 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHC1P29353 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.8■□□□□ 0.12
SHC1P29353 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.8■□□□□ 0.12
SHC1P29353 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.8■□□□□ 0.12
SHC1P29353 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SHC1P29353 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.8■□□□□ 0.12
SHC1P29353 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SHC1P29353 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.8■□□□□ 0.12
SHC1P29353 PMPCAP1-201ENST00000508114 1576 ntBASIC15.8■□□□□ 0.12
SHC1P29353 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SHC1P29353 AC008894.3-201ENST00000624324 3103 ntBASIC15.8■□□□□ 0.12
SHC1P29353 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SHC1P29353 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.8■□□□□ 0.12
SHC1P29353 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.8■□□□□ 0.12
SHC1P29353 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHC1P29353 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.8■□□□□ 0.12
SHC1P29353 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.8■□□□□ 0.12
SHC1P29353 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SHC1P29353 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.8■□□□□ 0.12
SHC1P29353 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.8■□□□□ 0.12
SHC1P29353 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SHC1P29353 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.8■□□□□ 0.12
SHC1P29353 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SHC1P29353 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHC1P29353 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHC1P29353 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHC1P29353 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHC1P29353 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHC1P29353 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SHC1P29353 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
SHC1P29353 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.8■□□□□ 0.12
SHC1P29353 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.8■□□□□ 0.12
SHC1P29353 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.8■□□□□ 0.12
SHC1P29353 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.8■□□□□ 0.12
SHC1P29353 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHC1P29353 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.8■□□□□ 0.12
SHC1P29353 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SHC1P29353 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
SHC1P29353 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.8■□□□□ 0.12
SHC1P29353 AC073592.5-201ENST00000624854 528 ntBASIC15.8■□□□□ 0.12
SHC1P29353 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.8■□□□□ 0.12
SHC1P29353 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHC1P29353 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHC1P29353 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SHC1P29353 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SHC1P29353 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHC1P29353 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SHC1P29353 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.8■□□□□ 0.12
SHC1P29353 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHC1P29353 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHC1P29353 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SHC1P29353 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
SHC1P29353 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHC1P29353 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHC1P29353 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHC1P29353 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHC1P29353 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHC1P29353 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms