Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AL353135.1-201ENST00000606729 504 ntBASIC17.36■□□□□ 0.37
RETP07949 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RETP07949 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.36■□□□□ 0.37
RETP07949 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.36■□□□□ 0.37
RETP07949 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RETP07949 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.36■□□□□ 0.37
RETP07949 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.36■□□□□ 0.37
RETP07949 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
RETP07949 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RETP07949 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
RETP07949 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RETP07949 AL353593.2-201ENST00000602529 1483 ntBASIC17.36■□□□□ 0.37
RETP07949 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RETP07949 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RETP07949 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RETP07949 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RETP07949 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RETP07949 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
RETP07949 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RETP07949 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RETP07949 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.35■□□□□ 0.37
RETP07949 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.35■□□□□ 0.37
RETP07949 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RETP07949 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.35■□□□□ 0.37
RETP07949 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RETP07949 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.35■□□□□ 0.37
RETP07949 FZD10-202ENST00000539839 3282 ntBASIC17.35■□□□□ 0.37
RETP07949 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RETP07949 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RETP07949 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RETP07949 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RETP07949 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RETP07949 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.35■□□□□ 0.37
RETP07949 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RETP07949 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.35■□□□□ 0.37
RETP07949 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RETP07949 TERF1P3-201ENST00000505638 1227 ntBASIC17.35■□□□□ 0.37
RETP07949 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.35■□□□□ 0.37
RETP07949 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.35■□□□□ 0.37
RETP07949 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RETP07949 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.35■□□□□ 0.37
RETP07949 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.35■□□□□ 0.37
RETP07949 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RETP07949 AL390955.2-201ENST00000603032 514 ntBASIC17.35■□□□□ 0.37
RETP07949 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RETP07949 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RETP07949 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RETP07949 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
RETP07949 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RETP07949 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
RETP07949 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RETP07949 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
RETP07949 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RETP07949 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.34■□□□□ 0.37
RETP07949 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RETP07949 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.34■□□□□ 0.37
RETP07949 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RETP07949 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.34■□□□□ 0.37
RETP07949 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.34■□□□□ 0.37
RETP07949 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
RETP07949 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RETP07949 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RETP07949 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RETP07949 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RETP07949 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.34■□□□□ 0.37
RETP07949 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.34■□□□□ 0.37
RETP07949 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.34■□□□□ 0.37
RETP07949 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.34■□□□□ 0.37
RETP07949 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.34■□□□□ 0.37
RETP07949 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.34■□□□□ 0.37
RETP07949 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.34■□□□□ 0.37
RETP07949 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RETP07949 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.34■□□□□ 0.37
RETP07949 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
RETP07949 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
RETP07949 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.34■□□□□ 0.37
RETP07949 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RETP07949 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RETP07949 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
RETP07949 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.33■□□□□ 0.37
RETP07949 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RETP07949 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RETP07949 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
RETP07949 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
RETP07949 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RETP07949 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RETP07949 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RETP07949 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.33■□□□□ 0.36
RETP07949 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RETP07949 AP002414.1-201ENST00000391405 1147 ntBASIC17.33■□□□□ 0.36
RETP07949 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RETP07949 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.33■□□□□ 0.36
RETP07949 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.33■□□□□ 0.36
RETP07949 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RETP07949 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.33■□□□□ 0.36
RETP07949 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.33■□□□□ 0.36
RETP07949 OR7E47P-204ENST00000575924 449 ntBASIC17.33■□□□□ 0.36
RETP07949 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.33■□□□□ 0.36
RETP07949 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.33■□□□□ 0.36
RETP07949 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms