Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ALDH1A1P00352 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ALDH1A1P00352 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ALDH1A1P00352 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC19.44■□□□□ 0.7
ALDH1A1P00352 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC19.44■□□□□ 0.7
ALDH1A1P00352 AC079776.1-201ENST00000401540 1152 ntBASIC19.44■□□□□ 0.7
ALDH1A1P00352 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.44■□□□□ 0.7
ALDH1A1P00352 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
ALDH1A1P00352 AL138918.1-201ENST00000568306 659 ntBASIC19.44■□□□□ 0.7
ALDH1A1P00352 AC091167.2-201ENST00000579581 588 ntBASIC19.44■□□□□ 0.7
ALDH1A1P00352 AP001350.2-201ENST00000625104 1094 ntBASIC19.44■□□□□ 0.7
ALDH1A1P00352 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.44■□□□□ 0.7
ALDH1A1P00352 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ALDH1A1P00352 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ALDH1A1P00352 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ALDH1A1P00352 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ALDH1A1P00352 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ALDH1A1P00352 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.44■□□□□ 0.7
ALDH1A1P00352 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ALDH1A1P00352 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ALDH1A1P00352 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ALDH1A1P00352 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ALDH1A1P00352 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.43■□□□□ 0.7
ALDH1A1P00352 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ALDH1A1P00352 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ALDH1A1P00352 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ALDH1A1P00352 AC116562.4-201ENST00000641316 2276 ntBASIC19.43■□□□□ 0.7
ALDH1A1P00352 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.43■□□□□ 0.7
ALDH1A1P00352 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.43■□□□□ 0.7
ALDH1A1P00352 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ALDH1A1P00352 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC19.43■□□□□ 0.7
ALDH1A1P00352 DGCR5-201ENST00000399539 862 ntBASIC19.43■□□□□ 0.7
ALDH1A1P00352 PP14571-201ENST00000404327 934 ntTSL 2 BASIC19.43■□□□□ 0.7
ALDH1A1P00352 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ALDH1A1P00352 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.43■□□□□ 0.7
ALDH1A1P00352 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC19.43■□□□□ 0.7
ALDH1A1P00352 NOP2-211ENST00000540228 668 ntTSL 2 BASIC19.43■□□□□ 0.7
ALDH1A1P00352 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC19.43■□□□□ 0.7
ALDH1A1P00352 RAB43P1-201ENST00000561790 589 ntBASIC19.43■□□□□ 0.7
ALDH1A1P00352 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC19.43■□□□□ 0.7
ALDH1A1P00352 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC19.43■□□□□ 0.7
ALDH1A1P00352 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ALDH1A1P00352 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ALDH1A1P00352 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ALDH1A1P00352 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.43■□□□□ 0.7
ALDH1A1P00352 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.43■□□□□ 0.7
ALDH1A1P00352 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ALDH1A1P00352 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.43■□□□□ 0.7
ALDH1A1P00352 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ALDH1A1P00352 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ALDH1A1P00352 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ALDH1A1P00352 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC19.42■□□□□ 0.7
ALDH1A1P00352 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ALDH1A1P00352 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.42■□□□□ 0.7
ALDH1A1P00352 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ALDH1A1P00352 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ALDH1A1P00352 MIR658-201ENST00000385210 100 ntBASIC19.42■□□□□ 0.7
ALDH1A1P00352 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC19.42■□□□□ 0.7
ALDH1A1P00352 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
ALDH1A1P00352 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ALDH1A1P00352 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC19.42■□□□□ 0.7
ALDH1A1P00352 KRT17P8-201ENST00000540749 863 ntBASIC19.42■□□□□ 0.7
ALDH1A1P00352 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC19.42■□□□□ 0.7
ALDH1A1P00352 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC19.42■□□□□ 0.7
ALDH1A1P00352 RNA5-8SN1-201ENST00000610460 153 ntBASIC19.42■□□□□ 0.7
ALDH1A1P00352 RNA5-8SN5-202ENST00000612463 153 ntBASIC19.42■□□□□ 0.7
ALDH1A1P00352 RNA5-8SN4-201ENST00000613359 153 ntBASIC19.42■□□□□ 0.7
ALDH1A1P00352 TEX28P1-201ENST00000613479 1221 ntBASIC19.42■□□□□ 0.7
ALDH1A1P00352 TEX28P2-201ENST00000617764 1221 ntBASIC19.42■□□□□ 0.7
ALDH1A1P00352 RNA5-8SN5-201ENST00000619471 153 ntBASIC19.42■□□□□ 0.7
ALDH1A1P00352 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ALDH1A1P00352 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ALDH1A1P00352 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ALDH1A1P00352 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ALDH1A1P00352 CETN4P-206ENST00000642099 2168 ntBASIC19.42■□□□□ 0.7
ALDH1A1P00352 BTBD7P1-201ENST00000447253 1453 ntBASIC19.41■□□□□ 0.7
ALDH1A1P00352 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALDH1A1P00352 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALDH1A1P00352 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.41■□□□□ 0.7
ALDH1A1P00352 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALDH1A1P00352 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALDH1A1P00352 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.41■□□□□ 0.7
ALDH1A1P00352 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALDH1A1P00352 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ALDH1A1P00352 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ALDH1A1P00352 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC19.41■□□□□ 0.7
ALDH1A1P00352 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ALDH1A1P00352 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
ALDH1A1P00352 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALDH1A1P00352 AL353705.2-201ENST00000428243 662 ntBASIC19.41■□□□□ 0.7
ALDH1A1P00352 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC19.41■□□□□ 0.7
ALDH1A1P00352 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC19.41■□□□□ 0.7
ALDH1A1P00352 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC19.41■□□□□ 0.7
ALDH1A1P00352 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.41■□□□□ 0.7
ALDH1A1P00352 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC19.41■□□□□ 0.7
ALDH1A1P00352 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ALDH1A1P00352 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
ALDH1A1P00352 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
ALDH1A1P00352 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC19.41■□□□□ 0.7
ALDH1A1P00352 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms