Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 RCN1P2-201ENST00000398357 915 ntBASIC17.67■□□□□ 0.42
TOP3BO95985 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
TOP3BO95985 METTL21AP1-201ENST00000438852 635 ntBASIC17.67■□□□□ 0.42
TOP3BO95985 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TOP3BO95985 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
TOP3BO95985 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.67■□□□□ 0.42
TOP3BO95985 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.67■□□□□ 0.42
TOP3BO95985 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.67■□□□□ 0.42
TOP3BO95985 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.67■□□□□ 0.42
TOP3BO95985 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.67■□□□□ 0.42
TOP3BO95985 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TOP3BO95985 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TOP3BO95985 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TOP3BO95985 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.67■□□□□ 0.42
TOP3BO95985 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.67■□□□□ 0.42
TOP3BO95985 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TOP3BO95985 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.67■□□□□ 0.42
TOP3BO95985 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TOP3BO95985 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.67■□□□□ 0.42
TOP3BO95985 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TOP3BO95985 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TOP3BO95985 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TOP3BO95985 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TOP3BO95985 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.66■□□□□ 0.42
TOP3BO95985 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TOP3BO95985 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TOP3BO95985 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TOP3BO95985 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
TOP3BO95985 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TOP3BO95985 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TOP3BO95985 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TOP3BO95985 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.66■□□□□ 0.42
TOP3BO95985 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TOP3BO95985 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.66■□□□□ 0.42
TOP3BO95985 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TOP3BO95985 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TOP3BO95985 RPS2P1-201ENST00000434010 821 ntBASIC17.66■□□□□ 0.42
TOP3BO95985 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TOP3BO95985 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TOP3BO95985 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.66■□□□□ 0.42
TOP3BO95985 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.66■□□□□ 0.42
TOP3BO95985 AC012640.2-201ENST00000561606 901 ntBASIC17.66■□□□□ 0.42
TOP3BO95985 AL596442.2-201ENST00000610240 980 ntBASIC17.66■□□□□ 0.42
TOP3BO95985 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.66■□□□□ 0.42
TOP3BO95985 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TOP3BO95985 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TOP3BO95985 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TOP3BO95985 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TOP3BO95985 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.66■□□□□ 0.42
TOP3BO95985 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TOP3BO95985 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TOP3BO95985 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TOP3BO95985 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TOP3BO95985 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.66■□□□□ 0.42
TOP3BO95985 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TOP3BO95985 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TOP3BO95985 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TOP3BO95985 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TOP3BO95985 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.66■□□□□ 0.42
TOP3BO95985 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.66■□□□□ 0.42
TOP3BO95985 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TOP3BO95985 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TOP3BO95985 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.66■□□□□ 0.42
TOP3BO95985 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TOP3BO95985 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TOP3BO95985 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
TOP3BO95985 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TOP3BO95985 AC106886.4-201ENST00000623557 2502 ntBASIC17.65■□□□□ 0.42
TOP3BO95985 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TOP3BO95985 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.65■□□□□ 0.42
TOP3BO95985 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
TOP3BO95985 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TOP3BO95985 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TOP3BO95985 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.65■□□□□ 0.42
TOP3BO95985 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TOP3BO95985 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TOP3BO95985 RPS2P28-201ENST00000314255 741 ntBASIC17.65■□□□□ 0.42
TOP3BO95985 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TOP3BO95985 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TOP3BO95985 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.65■□□□□ 0.42
TOP3BO95985 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TOP3BO95985 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.65■□□□□ 0.42
TOP3BO95985 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.65■□□□□ 0.42
TOP3BO95985 AC244107.1-201ENST00000442033 332 ntBASIC17.65■□□□□ 0.42
TOP3BO95985 DNAJB3-201ENST00000446806 729 ntBASIC17.65■□□□□ 0.42
TOP3BO95985 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.65■□□□□ 0.42
TOP3BO95985 CYMP-203ENST00000474680 1263 ntBASIC17.65■□□□□ 0.42
TOP3BO95985 RNA5SP415-201ENST00000517246 115 ntBASIC17.65■□□□□ 0.42
TOP3BO95985 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.65■□□□□ 0.42
TOP3BO95985 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.65■□□□□ 0.42
TOP3BO95985 AP001269.4-201ENST00000609611 512 ntBASIC17.65■□□□□ 0.42
TOP3BO95985 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TOP3BO95985 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TOP3BO95985 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TOP3BO95985 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
TOP3BO95985 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TOP3BO95985 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TOP3BO95985 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
TOP3BO95985 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TOP3BO95985 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms