Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CSPG5O95196 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.47■□□□□ 0.55
CSPG5O95196 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CSPG5O95196 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CSPG5O95196 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.47■□□□□ 0.55
CSPG5O95196 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CSPG5O95196 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.47■□□□□ 0.55
CSPG5O95196 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CSPG5O95196 ACTG1P14-201ENST00000446382 1122 ntBASIC18.47■□□□□ 0.55
CSPG5O95196 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CSPG5O95196 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CSPG5O95196 AC025678.2-201ENST00000562061 970 ntBASIC18.47■□□□□ 0.55
CSPG5O95196 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.47■□□□□ 0.55
CSPG5O95196 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.47■□□□□ 0.55
CSPG5O95196 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.47■□□□□ 0.55
CSPG5O95196 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.47■□□□□ 0.55
CSPG5O95196 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CSPG5O95196 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CSPG5O95196 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CSPG5O95196 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CSPG5O95196 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CSPG5O95196 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CSPG5O95196 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.47■□□□□ 0.55
CSPG5O95196 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CSPG5O95196 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CSPG5O95196 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CSPG5O95196 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CSPG5O95196 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CSPG5O95196 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CSPG5O95196 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CSPG5O95196 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CSPG5O95196 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CSPG5O95196 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
CSPG5O95196 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.46■□□□□ 0.55
CSPG5O95196 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.46■□□□□ 0.55
CSPG5O95196 BX276092.7-203ENST00000637198 1536 ntBASIC18.46■□□□□ 0.55
CSPG5O95196 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CSPG5O95196 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.46■□□□□ 0.55
CSPG5O95196 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.46■□□□□ 0.55
CSPG5O95196 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.46■□□□□ 0.55
CSPG5O95196 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.46■□□□□ 0.55
CSPG5O95196 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CSPG5O95196 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.46■□□□□ 0.55
CSPG5O95196 DUX4L27-201ENST00000554796 1261 ntBASIC18.46■□□□□ 0.55
CSPG5O95196 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.46■□□□□ 0.55
CSPG5O95196 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.46■□□□□ 0.55
CSPG5O95196 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.46■□□□□ 0.55
CSPG5O95196 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.46■□□□□ 0.55
CSPG5O95196 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.46■□□□□ 0.55
CSPG5O95196 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.46■□□□□ 0.55
CSPG5O95196 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CSPG5O95196 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
CSPG5O95196 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CSPG5O95196 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.46■□□□□ 0.55
CSPG5O95196 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CSPG5O95196 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CSPG5O95196 AP000997.3-201ENST00000623333 2250 ntBASIC18.46■□□□□ 0.54
CSPG5O95196 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
CSPG5O95196 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.46■□□□□ 0.54
CSPG5O95196 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSPG5O95196 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSPG5O95196 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.45■□□□□ 0.54
CSPG5O95196 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.45■□□□□ 0.54
CSPG5O95196 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.45■□□□□ 0.54
CSPG5O95196 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSPG5O95196 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.45■□□□□ 0.54
CSPG5O95196 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSPG5O95196 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CSPG5O95196 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSPG5O95196 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSPG5O95196 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSPG5O95196 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSPG5O95196 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.45■□□□□ 0.54
CSPG5O95196 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.45■□□□□ 0.54
CSPG5O95196 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CSPG5O95196 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSPG5O95196 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.45■□□□□ 0.54
CSPG5O95196 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.45■□□□□ 0.54
CSPG5O95196 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.45■□□□□ 0.54
CSPG5O95196 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.45■□□□□ 0.54
CSPG5O95196 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
CSPG5O95196 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CSPG5O95196 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSPG5O95196 WIZP1-201ENST00000531444 2299 ntBASIC18.45■□□□□ 0.54
CSPG5O95196 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CSPG5O95196 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CSPG5O95196 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CSPG5O95196 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CSPG5O95196 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CSPG5O95196 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSPG5O95196 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.45■□□□□ 0.54
CSPG5O95196 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSPG5O95196 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CSPG5O95196 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.45■□□□□ 0.54
CSPG5O95196 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.45■□□□□ 0.54
CSPG5O95196 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CSPG5O95196 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.45■□□□□ 0.54
CSPG5O95196 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CSPG5O95196 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CSPG5O95196 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms