Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.87■□□□□ 0.13
NKX2-2O95096 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.87■□□□□ 0.13
NKX2-2O95096 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.87■□□□□ 0.13
NKX2-2O95096 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.87■□□□□ 0.13
NKX2-2O95096 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.87■□□□□ 0.13
NKX2-2O95096 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.87■□□□□ 0.13
NKX2-2O95096 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.87■□□□□ 0.13
NKX2-2O95096 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.87■□□□□ 0.13
NKX2-2O95096 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.87■□□□□ 0.13
NKX2-2O95096 AL121912.1-201ENST00000603683 238 ntBASIC15.87■□□□□ 0.13
NKX2-2O95096 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
NKX2-2O95096 AC107918.4-202ENST00000641623 219 ntBASIC15.87■□□□□ 0.13
NKX2-2O95096 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NKX2-2O95096 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
NKX2-2O95096 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NKX2-2O95096 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NKX2-2O95096 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NKX2-2O95096 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NKX2-2O95096 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.87■□□□□ 0.13
NKX2-2O95096 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NKX2-2O95096 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NKX2-2O95096 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NKX2-2O95096 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.87■□□□□ 0.13
NKX2-2O95096 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NKX2-2O95096 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NKX2-2O95096 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.87■□□□□ 0.13
NKX2-2O95096 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.87■□□□□ 0.13
NKX2-2O95096 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NKX2-2O95096 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
NKX2-2O95096 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
NKX2-2O95096 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
NKX2-2O95096 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
NKX2-2O95096 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.86■□□□□ 0.13
NKX2-2O95096 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.86■□□□□ 0.13
NKX2-2O95096 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NKX2-2O95096 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NKX2-2O95096 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
NKX2-2O95096 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NKX2-2O95096 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NKX2-2O95096 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NKX2-2O95096 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NKX2-2O95096 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
NKX2-2O95096 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
NKX2-2O95096 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.86■□□□□ 0.13
NKX2-2O95096 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NKX2-2O95096 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NKX2-2O95096 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NKX2-2O95096 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.86■□□□□ 0.13
NKX2-2O95096 AL450487.1-201ENST00000426799 995 ntBASIC15.86■□□□□ 0.13
NKX2-2O95096 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.86■□□□□ 0.13
NKX2-2O95096 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NKX2-2O95096 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NKX2-2O95096 DUX4L17-201ENST00000557360 1267 ntBASIC15.86■□□□□ 0.13
NKX2-2O95096 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
NKX2-2O95096 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NKX2-2O95096 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NKX2-2O95096 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NKX2-2O95096 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NKX2-2O95096 AC009053.2-201ENST00000563701 2365 ntBASIC15.86■□□□□ 0.13
NKX2-2O95096 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NKX2-2O95096 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NKX2-2O95096 AC243591.1-201ENST00000452967 1364 ntBASIC15.86■□□□□ 0.13
NKX2-2O95096 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NKX2-2O95096 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NKX2-2O95096 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.85■□□□□ 0.13
NKX2-2O95096 AC005915.1-201ENST00000624912 2018 ntBASIC15.85■□□□□ 0.13
NKX2-2O95096 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NKX2-2O95096 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NKX2-2O95096 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NKX2-2O95096 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
NKX2-2O95096 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
NKX2-2O95096 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
NKX2-2O95096 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
NKX2-2O95096 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NKX2-2O95096 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
NKX2-2O95096 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
NKX2-2O95096 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
NKX2-2O95096 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
NKX2-2O95096 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.85■□□□□ 0.13
NKX2-2O95096 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.85■□□□□ 0.13
NKX2-2O95096 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.85■□□□□ 0.13
NKX2-2O95096 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.85■□□□□ 0.13
NKX2-2O95096 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
NKX2-2O95096 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.85■□□□□ 0.13
NKX2-2O95096 AC073648.2-201ENST00000510116 352 ntBASIC15.85■□□□□ 0.13
NKX2-2O95096 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.85■□□□□ 0.13
NKX2-2O95096 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.85■□□□□ 0.13
NKX2-2O95096 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.85■□□□□ 0.13
NKX2-2O95096 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.85■□□□□ 0.13
NKX2-2O95096 AC006557.2-201ENST00000592985 1240 ntBASIC15.85■□□□□ 0.13
NKX2-2O95096 TERC-201ENST00000602385 541 ntBASIC15.85■□□□□ 0.13
NKX2-2O95096 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.85■□□□□ 0.13
NKX2-2O95096 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.85■□□□□ 0.13
NKX2-2O95096 TP73-AS1-207ENST00000624167 988 ntBASIC15.85■□□□□ 0.13
NKX2-2O95096 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NKX2-2O95096 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.85■□□□□ 0.13
NKX2-2O95096 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NKX2-2O95096 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NKX2-2O95096 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.85■□□□□ 0.13
NKX2-2O95096 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms