Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC21.23■□□□□ 0.99
SMARCA5O60264 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC21.23■□□□□ 0.99
SMARCA5O60264 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC21.23■□□□□ 0.99
SMARCA5O60264 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC21.23■□□□□ 0.99
SMARCA5O60264 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC21.23■□□□□ 0.99
SMARCA5O60264 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
SMARCA5O60264 AL121912.1-201ENST00000603683 238 ntBASIC21.23■□□□□ 0.99
SMARCA5O60264 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC21.23■□□□□ 0.99
SMARCA5O60264 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SMARCA5O60264 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SMARCA5O60264 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SMARCA5O60264 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SMARCA5O60264 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMARCA5O60264 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMARCA5O60264 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMARCA5O60264 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMARCA5O60264 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC21.22■□□□□ 0.99
SMARCA5O60264 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC21.22■□□□□ 0.99
SMARCA5O60264 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SMARCA5O60264 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SMARCA5O60264 HNRNPRP1-201ENST00000453465 1695 ntBASIC21.22■□□□□ 0.99
SMARCA5O60264 CA12-203ENST00000422263 2556 ntTSL 2 BASIC21.22■□□□□ 0.99
SMARCA5O60264 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMARCA5O60264 RNF216P1-203ENST00000404404 2427 ntBASIC21.22■□□□□ 0.99
SMARCA5O60264 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SMARCA5O60264 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMARCA5O60264 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMARCA5O60264 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SMARCA5O60264 HIST2H3DP1-201ENST00000401004 416 ntBASIC21.22■□□□□ 0.99
SMARCA5O60264 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SMARCA5O60264 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC21.22■□□□□ 0.99
SMARCA5O60264 FAM197Y8-203ENST00000450145 560 ntBASIC21.22■□□□□ 0.99
SMARCA5O60264 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SMARCA5O60264 RNPS1P1-201ENST00000507437 918 ntBASIC21.22■□□□□ 0.99
SMARCA5O60264 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC21.22■□□□□ 0.99
SMARCA5O60264 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC21.22■□□□□ 0.99
SMARCA5O60264 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC21.22■□□□□ 0.99
SMARCA5O60264 PNMT-203ENST00000581428 677 ntTSL 2 BASIC21.22■□□□□ 0.99
SMARCA5O60264 AC104692.2-201ENST00000603054 253 ntBASIC21.22■□□□□ 0.99
SMARCA5O60264 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC21.22■□□□□ 0.99
SMARCA5O60264 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC21.22■□□□□ 0.99
SMARCA5O60264 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SMARCA5O60264 AC105020.1-201ENST00000435356 2205 ntBASIC21.22■□□□□ 0.99
SMARCA5O60264 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SMARCA5O60264 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMARCA5O60264 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMARCA5O60264 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SMARCA5O60264 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMARCA5O60264 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SMARCA5O60264 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SMARCA5O60264 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
SMARCA5O60264 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMARCA5O60264 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMARCA5O60264 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SMARCA5O60264 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.22■□□□□ 0.99
SMARCA5O60264 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SMARCA5O60264 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC21.21■□□□□ 0.99
SMARCA5O60264 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC21.21■□□□□ 0.99
SMARCA5O60264 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMARCA5O60264 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMARCA5O60264 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC21.21■□□□□ 0.99
SMARCA5O60264 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMARCA5O60264 GPR89P-201ENST00000407924 1495 ntBASIC21.21■□□□□ 0.99
SMARCA5O60264 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC21.21■□□□□ 0.99
SMARCA5O60264 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SMARCA5O60264 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMARCA5O60264 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMARCA5O60264 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC21.21■□□□□ 0.99
SMARCA5O60264 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC21.21■□□□□ 0.99
SMARCA5O60264 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMARCA5O60264 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
SMARCA5O60264 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC21.21■□□□□ 0.99
SMARCA5O60264 IRF8-202ENST00000562492 946 ntTSL 3 BASIC21.21■□□□□ 0.99
SMARCA5O60264 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21.21■□□□□ 0.99
SMARCA5O60264 AL121894.2-201ENST00000602977 491 ntBASIC21.21■□□□□ 0.99
SMARCA5O60264 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SMARCA5O60264 AC006504.4-201ENST00000592118 1568 ntBASIC21.21■□□□□ 0.99
SMARCA5O60264 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SMARCA5O60264 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMARCA5O60264 PRORSD1P-202ENST00000563365 2154 ntBASIC21.21■□□□□ 0.99
SMARCA5O60264 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMARCA5O60264 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC21.21■□□□□ 0.99
SMARCA5O60264 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMARCA5O60264 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMARCA5O60264 NCF1C-201ENST00000438382 1427 ntBASIC21.21■□□□□ 0.99
SMARCA5O60264 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
SMARCA5O60264 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
SMARCA5O60264 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
SMARCA5O60264 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMARCA5O60264 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMARCA5O60264 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC21.2■□□□□ 0.98
SMARCA5O60264 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC21.2■□□□□ 0.98
SMARCA5O60264 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMARCA5O60264 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC21.2■□□□□ 0.98
SMARCA5O60264 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMARCA5O60264 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC21.2■□□□□ 0.98
SMARCA5O60264 RAB17-203ENST00000409576 466 ntTSL 3 BASIC21.2■□□□□ 0.98
SMARCA5O60264 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMARCA5O60264 SCARNA2-201ENST00000458748 420 ntBASIC21.2■□□□□ 0.98
SMARCA5O60264 MOK-208ENST00000519058 917 ntTSL 2 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms