Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
O00370 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.37■□□□□ 0.53
O00370 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
O00370 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
O00370 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
O00370 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.37■□□□□ 0.53
O00370 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
O00370 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
O00370 ACTG1P4-201ENST00000425123 1122 ntBASIC18.37■□□□□ 0.53
O00370 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.37■□□□□ 0.53
O00370 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.37■□□□□ 0.53
O00370 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.37■□□□□ 0.53
O00370 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.37■□□□□ 0.53
O00370 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.37■□□□□ 0.53
O00370 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.37■□□□□ 0.53
O00370 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
O00370 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
O00370 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
O00370 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.37■□□□□ 0.53
O00370 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
O00370 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
O00370 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.37■□□□□ 0.53
O00370 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
O00370 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
O00370 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
O00370 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
O00370 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.37■□□□□ 0.53
O00370 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
O00370 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
O00370 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
O00370 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
O00370 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
O00370 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
O00370 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
O00370 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
O00370 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.36■□□□□ 0.53
O00370 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
O00370 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
O00370 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
O00370 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.36■□□□□ 0.53
O00370 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
O00370 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.36■□□□□ 0.53
O00370 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.36■□□□□ 0.53
O00370 AP002469.2-201ENST00000531724 424 ntBASIC18.36■□□□□ 0.53
O00370 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
O00370 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.36■□□□□ 0.53
O00370 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
O00370 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.36■□□□□ 0.53
O00370 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.36■□□□□ 0.53
O00370 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.36■□□□□ 0.53
O00370 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.36■□□□□ 0.53
O00370 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.36■□□□□ 0.53
O00370 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.36■□□□□ 0.53
O00370 AC064862.7-201ENST00000604520 867 ntBASIC18.36■□□□□ 0.53
O00370 NKILA-202ENST00000614771 2598 ntBASIC18.36■□□□□ 0.53
O00370 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.36■□□□□ 0.53
O00370 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
O00370 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
O00370 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
O00370 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
O00370 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
O00370 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
O00370 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
O00370 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
O00370 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
O00370 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
O00370 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
O00370 AC093525.9-201ENST00000624961 1746 ntBASIC18.35■□□□□ 0.53
O00370 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
O00370 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
O00370 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
O00370 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
O00370 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.35■□□□□ 0.53
O00370 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
O00370 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
O00370 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
O00370 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
O00370 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
O00370 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
O00370 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
O00370 LINC00982-205ENST00000420957 435 ntBASIC18.35■□□□□ 0.53
O00370 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.35■□□□□ 0.53
O00370 TPM4P1-201ENST00000436100 807 ntBASIC18.35■□□□□ 0.53
O00370 FAM197Y8-203ENST00000450145 560 ntBASIC18.35■□□□□ 0.53
O00370 AC018712.1-201ENST00000455767 687 ntBASIC18.35■□□□□ 0.53
O00370 RNPS1P1-201ENST00000507437 918 ntBASIC18.35■□□□□ 0.53
O00370 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
O00370 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
O00370 AL160237.2-201ENST00000556165 472 ntBASIC18.35■□□□□ 0.53
O00370 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.35■□□□□ 0.53
O00370 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.35■□□□□ 0.53
O00370 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.35■□□□□ 0.53
O00370 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.35■□□□□ 0.53
O00370 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.35■□□□□ 0.53
O00370 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
O00370 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
O00370 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
O00370 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
O00370 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
O00370 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms