Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.08□□□□□ -0.15
DUXBA0A1W2PPF3 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
DUXBA0A1W2PPF3 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
DUXBA0A1W2PPF3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
DUXBA0A1W2PPF3 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.08□□□□□ -0.15
DUXBA0A1W2PPF3 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.08□□□□□ -0.15
DUXBA0A1W2PPF3 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
DUXBA0A1W2PPF3 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
DUXBA0A1W2PPF3 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 HLA-A-202ENST00000376806 1854 ntBASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 ECEL1P3-201ENST00000427961 737 ntBASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 SAPCD2P2-201ENST00000431719 1174 ntBASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 AC068472.1-201ENST00000474589 881 ntBASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 NAA38-203ENST00000575071 553 ntTSL 2 BASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 AC019129.2-201ENST00000609837 1235 ntBASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 MTHFR-217ENST00000641820 1569 ntBASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 AC092171.3-201ENST00000610122 2651 ntBASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DUXBA0A1W2PPF3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
DUXBA0A1W2PPF3 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
DUXBA0A1W2PPF3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
DUXBA0A1W2PPF3 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
DUXBA0A1W2PPF3 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.07□□□□□ -0.16
DUXBA0A1W2PPF3 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
DUXBA0A1W2PPF3 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
DUXBA0A1W2PPF3 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
DUXBA0A1W2PPF3 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC14.07□□□□□ -0.16
DUXBA0A1W2PPF3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
DUXBA0A1W2PPF3 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
DUXBA0A1W2PPF3 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
DUXBA0A1W2PPF3 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.07□□□□□ -0.16
DUXBA0A1W2PPF3 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.07□□□□□ -0.16
DUXBA0A1W2PPF3 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
DUXBA0A1W2PPF3 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
DUXBA0A1W2PPF3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
DUXBA0A1W2PPF3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
DUXBA0A1W2PPF3 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC14.07□□□□□ -0.16
DUXBA0A1W2PPF3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC14.07□□□□□ -0.16
DUXBA0A1W2PPF3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC14.07□□□□□ -0.16
DUXBA0A1W2PPF3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC14.07□□□□□ -0.16
DUXBA0A1W2PPF3 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC14.07□□□□□ -0.16
DUXBA0A1W2PPF3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
DUXBA0A1W2PPF3 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC14.07□□□□□ -0.16
DUXBA0A1W2PPF3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC14.07□□□□□ -0.16
DUXBA0A1W2PPF3 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.07□□□□□ -0.16
DUXBA0A1W2PPF3 AC111152.3-201ENST00000569699 673 ntBASIC14.07□□□□□ -0.16
DUXBA0A1W2PPF3 AC109462.3-201ENST00000573934 613 ntBASIC14.07□□□□□ -0.16
DUXBA0A1W2PPF3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
DUXBA0A1W2PPF3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
DUXBA0A1W2PPF3 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
DUXBA0A1W2PPF3 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
DUXBA0A1W2PPF3 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
DUXBA0A1W2PPF3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
DUXBA0A1W2PPF3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.07□□□□□ -0.16
DUXBA0A1W2PPF3 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
DUXBA0A1W2PPF3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
DUXBA0A1W2PPF3 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.07□□□□□ -0.16
DUXBA0A1W2PPF3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC14.07□□□□□ -0.16
DUXBA0A1W2PPF3 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
DUXBA0A1W2PPF3 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
DUXBA0A1W2PPF3 AC007950.2-201ENST00000615045 2347 ntBASIC14.07□□□□□ -0.16
DUXBA0A1W2PPF3 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms