Protein–RNA interactions for Protein: Q96I24

FUBP3, Far upstream element-binding protein 3, humanhuman

Known RBP eCLIP

Length 572 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP3Q96I24 USP33-209ENST00000481579 2866 ntTSL 25.83□□□□□ -1.486e-6■■■■□ 23.4
FUBP3Q96I24 PAQR9-203ENST00000498470 348 ntTSL 35.83□□□□□ -1.486e-6■■■■□ 23.4
FUBP3Q96I24 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.491e-7■■■■□ 23.4
FUBP3Q96I24 SLC30A9-202ENST00000505523 809 ntTSL 55.59□□□□□ -1.516e-6■■■■□ 23.4
FUBP3Q96I24 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.546e-6■■■■□ 23.4
FUBP3Q96I24 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.616e-6■■■■□ 23.4
FUBP3Q96I24 LINC01578-202ENST00000554133 1776 ntTSL 24.39□□□□□ -1.716e-6■■■■□ 23.4
FUBP3Q96I24 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.69□□□□□ -1.826e-6■■■■□ 23.4
FUBP3Q96I24 MIER3-208ENST00000452157 5240 ntTSL 1 (best)3.32□□□□□ -1.886e-6■■■■□ 23.4
FUBP3Q96I24 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.966e-6■■■■□ 23.4
FUBP3Q96I24 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.076e-6■■■■□ 23.4
FUBP3Q96I24 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.076e-6■■■■□ 23.4
FUBP3Q96I24 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.038e-17■■■■□ 23.4
FUBP3Q96I24 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.278e-17■■■■□ 23.4
FUBP3Q96I24 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -04e-8■■■■□ 23.4
FUBP3Q96I24 ANKRD46-206ENST00000520552 1686 ntTSL 1 (best) BASIC9.87□□□□□ -0.834e-8■■■■□ 23.4
FUBP3Q96I24 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.374e-8■■■■□ 23.4
FUBP3Q96I24 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.434e-8■■■■□ 23.4
FUBP3Q96I24 GLS-206ENST00000412247 693 ntTSL 36.44□□□□□ -1.386e-7■■■■□ 23.3
FUBP3Q96I24 GLS-208ENST00000457316 821 ntTSL 46.04□□□□□ -1.446e-7■■■■□ 23.3
FUBP3Q96I24 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.18□□□□□ -1.586e-7■■■■□ 23.3
FUBP3Q96I24 RNF11-203ENST00000494873 953 ntTSL 324.62■■□□□ 1.536e-13■■■■□ 23.3
FUBP3Q96I24 DPM1-203ENST00000371588 1075 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.682e-6■■■■□ 23.3
FUBP3Q96I24 DPM1-206ENST00000494752 789 ntTSL 39.67□□□□□ -0.862e-6■■■■□ 23.3
FUBP3Q96I24 DPM1-201ENST00000371582 1161 ntTSL 1 (best) BASIC8.08□□□□□ -1.122e-6■■■■□ 23.3
FUBP3Q96I24 DPM1-205ENST00000466152 1097 ntTSL 1 (best)7.42□□□□□ -1.222e-6■■■■□ 23.3
FUBP3Q96I24 CADM1-207ENST00000537140 1646 ntTSL 1 (best)23.36■■□□□ 1.338e-8■■■■□ 23.2
FUBP3Q96I24 CADM1-219ENST00000545960 630 ntTSL 516.95■□□□□ 0.38e-8■■■■□ 23.2
FUBP3Q96I24 CADM1-221ENST00000612235 1042 ntTSL 5 BASIC12.75□□□□□ -0.378e-8■■■■□ 23.2
FUBP3Q96I24 CADM1-212ENST00000542447 4223 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.678e-8■■■■□ 23.2
FUBP3Q96I24 CADM1-203ENST00000452722 8588 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.928e-8■■■■□ 23.2
FUBP3Q96I24 VAMP3-201ENST00000054666 2205 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.066e-11■■■■□ 23.1
FUBP3Q96I24 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.592e-10■■■■□ 23.1
FUBP3Q96I24 TNFRSF10B-201ENST00000276431 4146 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.654e-9■■■■□ 23.1
FUBP3Q96I24 TNFRSF10B-208ENST00000523752 3328 ntTSL 1 (best)7.89□□□□□ -1.154e-9■■■■□ 23.1
FUBP3Q96I24 SLC25A30-207ENST00000539591 3608 ntTSL 2 BASIC13.79□□□□□ -0.29e-7■■■■□ 23
FUBP3Q96I24 SLC25A30-206ENST00000523988 6041 ntTSL 27.28□□□□□ -1.249e-7■■■■□ 23
FUBP3Q96I24 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.279e-7■■■■□ 23
FUBP3Q96I24 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.349e-7■■■■□ 23
FUBP3Q96I24 ATP6AP2-223ENST00000637165 534 ntTSL 55.47□□□□□ -1.532e-28■■■■□ 23
FUBP3Q96I24 CDH2-201ENST00000269141 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.636e-8■■■■□ 23
FUBP3Q96I24 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC7.41□□□□□ -1.226e-8■■■■□ 23
FUBP3Q96I24 ZFHX3-203ENST00000397992 13841 ntTSL 1 (best) BASIC8.89□□□□□ -0.991e-6■■■■□ 22.9
FUBP3Q96I24 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.031e-6■■■■□ 22.9
FUBP3Q96I24 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC7.1□□□□□ -1.271e-6■■■■□ 22.9
FUBP3Q96I24 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.718e-9■■■■□ 22.9
FUBP3Q96I24 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.38e-9■■■■□ 22.9
FUBP3Q96I24 GOLGA3-202ENST00000450791 8870 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.648e-9■■■■□ 22.9
FUBP3Q96I24 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.698e-9■■■■□ 22.9
FUBP3Q96I24 HIVEP2-201ENST00000012134 9755 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.873e-6■■■■□ 22.9
FUBP3Q96I24 HIVEP2-203ENST00000367604 10032 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.953e-6■■■■□ 22.9
FUBP3Q96I24 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.143e-6■■■■□ 22.9
FUBP3Q96I24 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.448e-9■■■■□ 22.9
FUBP3Q96I24 PPP1R12A-205ENST00000546762 1257 ntTSL 55.47□□□□□ -1.538e-9■■■■□ 22.9
FUBP3Q96I24 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.262e-6■■■■□ 22.9
FUBP3Q96I24 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.192e-6■■■■□ 22.9
FUBP3Q96I24 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.551e-6■■■■□ 22.9
FUBP3Q96I24 ZNF264-201ENST00000263095 12163 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.765e-7■■■■□ 22.9
FUBP3Q96I24 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.374e-9■■■■□ 22.9
FUBP3Q96I24 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.084e-9■■■■□ 22.9
FUBP3Q96I24 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.531e-14■■■■□ 22.9
FUBP3Q96I24 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.242e-9■■■■□ 22.8
FUBP3Q96I24 CYB5A-201ENST00000299438 718 ntTSL 2 BASIC12.55□□□□□ -0.42e-9■■■■□ 22.8
FUBP3Q96I24 CYB5A-207ENST00000583418 5913 ntTSL 29.06□□□□□ -0.962e-9■■■■□ 22.8
FUBP3Q96I24 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC7.97□□□□□ -1.132e-9■■■■□ 22.8
FUBP3Q96I24 CYB5A-206ENST00000580678 1173 ntTSL 1 (best)7.6□□□□□ -1.192e-9■■■■□ 22.8
FUBP3Q96I24 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.39■□□□□ 0.212e-6■■■■□ 22.8
FUBP3Q96I24 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.032e-6■■■■□ 22.8
FUBP3Q96I24 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.641e-6■■■■□ 22.7
FUBP3Q96I24 IER3-202ENST00000376377 1350 ntBASIC19.66■□□□□ 0.742e-11■■■■□ 22.6
FUBP3Q96I24 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.072e-11■■■■□ 22.6
FUBP3Q96I24 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.791e-19■■■■□ 22.5
FUBP3Q96I24 ATP5L-204ENST00000529460 457 ntTSL 311.92□□□□□ -0.51e-19■■■■□ 22.5
FUBP3Q96I24 ATP5L-207ENST00000533172 336 ntTSL 210.76□□□□□ -0.691e-19■■■■□ 22.5
FUBP3Q96I24 ATP5L-202ENST00000524422 720 ntTSL 3 BASIC9.39□□□□□ -0.911e-19■■■■□ 22.5
FUBP3Q96I24 ATP5L-205ENST00000529770 575 ntTSL 27□□□□□ -1.291e-19■■■■□ 22.5
FUBP3Q96I24 ATP5L-206ENST00000529790 900 ntTSL 26.42□□□□□ -1.381e-19■■■■□ 22.5
FUBP3Q96I24 ATP5L-203ENST00000527186 1582 ntTSL 24.77□□□□□ -1.651e-19■■■■□ 22.5
FUBP3Q96I24 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.297e-10■■■■□ 22.5
FUBP3Q96I24 YY1-206ENST00000623799 2742 nt8.86□□□□□ -0.997e-10■■■■□ 22.5
FUBP3Q96I24 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.366e-8■■■■□ 22.3
FUBP3Q96I24 BNIP3L-207ENST00000523949 875 ntTSL 310.01□□□□□ -0.816e-8■■■■□ 22.3
FUBP3Q96I24 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.949e-7■■■■□ 22.3
FUBP3Q96I24 ZFP36L1-202ENST00000439696 3190 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.585e-7■■■■□ 22.2
FUBP3Q96I24 ZFP36L1-204ENST00000555997 3094 ntTSL 3 BASIC10.84□□□□□ -0.675e-7■■■■□ 22.2
FUBP3Q96I24 TAF4-203ENST00000474089 532 ntTSL 220.9■□□□□ 0.943e-6■■■■□ 22.2
FUBP3Q96I24 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.743e-6■■■■□ 22.2
FUBP3Q96I24 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.047e-7■■■■□ 22.1
FUBP3Q96I24 JMJD1C-204ENST00000467356 1305 ntTSL 1 (best)5.28□□□□□ -1.567e-7■■■■□ 22.1
FUBP3Q96I24 JMJD1C-203ENST00000402544 8011 ntTSL 1 (best)2.43□□□□□ -2.027e-7■■■■□ 22.1
FUBP3Q96I24 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.177e-7■■■■□ 22.1
FUBP3Q96I24 SLC35F5-209ENST00000469702 784 ntTSL 39.28□□□□□ -0.929e-7■■■■□ 22.1
FUBP3Q96I24 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.073e-6■■■■□ 22.1
FUBP3Q96I24 TMEM68-201ENST00000334667 2401 ntTSL 2 BASIC9.21□□□□□ -0.933e-6■■■■□ 22.1
FUBP3Q96I24 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.23□□□□□ -1.253e-6■■■■□ 22.1
FUBP3Q96I24 TMEM68-204ENST00000519460 2588 ntTSL 56.47□□□□□ -1.373e-6■■■■□ 22.1
FUBP3Q96I24 TMEM68-212ENST00000522470 726 ntTSL 35.53□□□□□ -1.523e-6■■■■□ 22.1
FUBP3Q96I24 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.613e-6■■■■□ 22.1
FUBP3Q96I24 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.73e-6■■■■□ 22.1
FUBP3Q96I24 ATP13A3-206ENST00000461660 3517 ntTSL 1 (best)4.28□□□□□ -1.726e-12■■■■□ 22.1
Retrieved 100 of 4,568 protein–RNA pairs in 408.4 ms