Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Traf4Q61382 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
Traf4Q61382 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Traf4Q61382 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Traf4Q61382 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Traf4Q61382 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Traf4Q61382 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Traf4Q61382 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Traf4Q61382 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Traf4Q61382 Gm10420-201ENSMUST00000121713 882 ntBASIC19.26■□□□□ 0.67
Traf4Q61382 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Traf4Q61382 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Traf4Q61382 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Traf4Q61382 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Traf4Q61382 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Traf4Q61382 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Traf4Q61382 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Traf4Q61382 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Traf4Q61382 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Traf4Q61382 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Traf4Q61382 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Traf4Q61382 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Traf4Q61382 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Traf4Q61382 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Traf4Q61382 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Traf4Q61382 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Traf4Q61382 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Traf4Q61382 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Traf4Q61382 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Traf4Q61382 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Traf4Q61382 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Traf4Q61382 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Traf4Q61382 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.23■□□□□ 0.67
Traf4Q61382 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Traf4Q61382 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Traf4Q61382 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Traf4Q61382 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Traf4Q61382 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Traf4Q61382 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Traf4Q61382 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Traf4Q61382 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Traf4Q61382 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.22■□□□□ 0.67
Traf4Q61382 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Traf4Q61382 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.21■□□□□ 0.67
Traf4Q61382 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.21■□□□□ 0.67
Traf4Q61382 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Traf4Q61382 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Traf4Q61382 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Traf4Q61382 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Traf4Q61382 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Traf4Q61382 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Traf4Q61382 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Traf4Q61382 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Traf4Q61382 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Traf4Q61382 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.19■□□□□ 0.66
Traf4Q61382 Gm44428-201ENSMUST00000204474 874 ntBASIC19.19■□□□□ 0.66
Traf4Q61382 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Traf4Q61382 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Traf4Q61382 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Traf4Q61382 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Traf4Q61382 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
Traf4Q61382 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Traf4Q61382 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Traf4Q61382 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Traf4Q61382 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Traf4Q61382 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Traf4Q61382 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.18■□□□□ 0.66
Traf4Q61382 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Traf4Q61382 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Traf4Q61382 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.17■□□□□ 0.66
Traf4Q61382 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Traf4Q61382 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Traf4Q61382 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Traf4Q61382 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.17■□□□□ 0.66
Traf4Q61382 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Traf4Q61382 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.16■□□□□ 0.66
Traf4Q61382 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Traf4Q61382 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Traf4Q61382 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Traf4Q61382 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Traf4Q61382 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.15■□□□□ 0.66
Traf4Q61382 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Traf4Q61382 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Traf4Q61382 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Traf4Q61382 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Traf4Q61382 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Traf4Q61382 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Traf4Q61382 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Traf4Q61382 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Traf4Q61382 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Traf4Q61382 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Traf4Q61382 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Traf4Q61382 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.14■□□□□ 0.65
Traf4Q61382 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Traf4Q61382 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Traf4Q61382 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Traf4Q61382 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Traf4Q61382 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Traf4Q61382 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Traf4Q61382 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms