Protein–RNA interactions for Protein: Q06406

LSM6, U6 snRNA-associated Sm-like protein LSm6, yeastyeast

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM6Q06406 GDA1YEL042W 1557 nt4.5□□□□□ -1.69
LSM6Q06406 NUP53YMR153W 1428 nt4.5□□□□□ -1.69
LSM6Q06406 FAL1YDR021W 1200 nt4.5□□□□□ -1.69
LSM6Q06406 MDE1YJR024C 735 nt4.5□□□□□ -1.69
LSM6Q06406 ELP4YPL101W 1371 nt4.5□□□□□ -1.69
LSM6Q06406 DOT1YDR440W 1749 nt4.49□□□□□ -1.69
LSM6Q06406 VMA3YEL027W 483 nt4.49□□□□□ -1.69
LSM6Q06406 YHR070C-AYHR070C-A 411 nt4.49□□□□□ -1.69
LSM6Q06406 MRPL19YNL185C 477 nt4.49□□□□□ -1.69
LSM6Q06406 YPR130CYPR130C 408 nt4.49□□□□□ -1.69
LSM6Q06406 GUA1YMR217W 1578 nt4.48□□□□□ -1.69
LSM6Q06406 HIR1YBL008W 2523 nt4.48□□□□□ -1.69
LSM6Q06406 FAT3YKL187C 2253 nt4.48□□□□□ -1.69
LSM6Q06406 TRP5YGL026C 2124 nt4.48□□□□□ -1.69
LSM6Q06406 YLL056CYLL056C 897 nt4.48□□□□□ -1.69
LSM6Q06406 YLR349WYLR349W 507 nt4.48□□□□□ -1.69
LSM6Q06406 DAP1YPL170W 459 nt4.48□□□□□ -1.69
LSM6Q06406 TKL1YPR074C 2043 nt4.48□□□□□ -1.69
LSM6Q06406 CST6YIL036W 1764 nt4.48□□□□□ -1.69
LSM6Q06406 ICP55YER078C 1536 nt4.47□□□□□ -1.69
LSM6Q06406 GAT1YFL021W 1533 nt4.47□□□□□ -1.69
LSM6Q06406 VTC2YFL004W 2487 nt4.47□□□□□ -1.69
LSM6Q06406 VCX1YDL128W 1236 nt4.47□□□□□ -1.69
LSM6Q06406 CIA1YDR267C 993 nt4.47□□□□□ -1.69
LSM6Q06406 YJL193WYJL193W 1209 nt4.47□□□□□ -1.69
LSM6Q06406 YPQ1YOL092W 927 nt4.47□□□□□ -1.69
LSM6Q06406 RIX7YLL034C 2514 nt4.47□□□□□ -1.69
LSM6Q06406 CBK1YNL161W 2271 nt4.46□□□□□ -1.7
LSM6Q06406 RUF23RUF23 254 nt4.46□□□□□ -1.7
LSM6Q06406 PFA3YNL326C 1011 nt4.46□□□□□ -1.7
LSM6Q06406 MDH3YDL078C 1032 nt4.45□□□□□ -1.7
LSM6Q06406 RPT3YDR394W 1287 nt4.45□□□□□ -1.7
LSM6Q06406 FSF1YOR271C 984 nt4.45□□□□□ -1.7
LSM6Q06406 FLC3YGL139W 2409 nt4.45□□□□□ -1.7
LSM6Q06406 MNN2YBR015C 1794 nt4.45□□□□□ -1.7
LSM6Q06406 ACC1YNR016C 6702 nt4.45□□□□□ -1.7
LSM6Q06406 YLL067CYLL067C 3618 nt4.45□□□□□ -1.7
LSM6Q06406 VBA1YMR088C 1689 nt4.45□□□□□ -1.7
LSM6Q06406 MSC3YLR219W 2187 nt4.44□□□□□ -1.7
LSM6Q06406 ISN1YOR155C 1353 nt4.44□□□□□ -1.7
LSM6Q06406 COX20YDR231C 618 nt4.44□□□□□ -1.7
LSM6Q06406 TMT1YER175C 900 nt4.44□□□□□ -1.7
LSM6Q06406 SUP2tY(GUA)D 75 nt4.44□□□□□ -1.7
LSM6Q06406 SUP11tY(GUA)F1 75 nt4.44□□□□□ -1.7
LSM6Q06406 SUP6tY(GUA)F2 75 nt4.44□□□□□ -1.7
LSM6Q06406 SUP7tY(GUA)J1 75 nt4.44□□□□□ -1.7
LSM6Q06406 SUP4tY(GUA)J2 75 nt4.44□□□□□ -1.7
LSM6Q06406 SUP5tY(GUA)M1 75 nt4.44□□□□□ -1.7
LSM6Q06406 SUP8tY(GUA)M2 75 nt4.44□□□□□ -1.7
LSM6Q06406 SUP3tY(GUA)O 75 nt4.44□□□□□ -1.7
LSM6Q06406 MEH1YKR007W 555 nt4.44□□□□□ -1.7
LSM6Q06406 YMR007WYMR007W 381 nt4.44□□□□□ -1.7
LSM6Q06406 ERI1YPL096C-A 207 nt4.44□□□□□ -1.7
LSM6Q06406 YHK8YHR048W 1545 nt4.44□□□□□ -1.7
LSM6Q06406 DOC1YGL240W 753 nt4.43□□□□□ -1.7
LSM6Q06406 TAL1YLR354C 1008 nt4.43□□□□□ -1.7
LSM6Q06406 YMC1YPR058W 924 nt4.43□□□□□ -1.7
LSM6Q06406 RPN7YPR108W 1290 nt4.43□□□□□ -1.7
LSM6Q06406 ECM31YBR176W 939 nt4.43□□□□□ -1.7
LSM6Q06406 OXP1YKL215C 3861 nt4.43□□□□□ -1.7
LSM6Q06406 ATP1YBL099W 1638 nt4.43□□□□□ -1.7
LSM6Q06406 SSK22YCR073C 3996 nt4.42□□□□□ -1.7
LSM6Q06406 RPN11YFR004W 921 nt4.42□□□□□ -1.7
LSM6Q06406 MAL11YGR289C 1851 nt4.42□□□□□ -1.7
LSM6Q06406 ASH1YKL185W 1767 nt4.42□□□□□ -1.7
LSM6Q06406 EXG1YLR300W 1347 nt4.42□□□□□ -1.7
LSM6Q06406 RBS1YDL189W 1374 nt4.41□□□□□ -1.7
LSM6Q06406 TRP1YDR007W 675 nt4.41□□□□□ -1.7
LSM6Q06406 SIP2YGL208W 1248 nt4.41□□□□□ -1.7
LSM6Q06406 tS(GCU)LtS(GCU)L 80 nt4.41□□□□□ -1.7
LSM6Q06406 YAL016C-AYAL016C-A 315 nt4.41□□□□□ -1.7
LSM6Q06406 RGT1YKL038W 3513 nt4.41□□□□□ -1.7
LSM6Q06406 YAP1801YHR161C 1914 nt4.4□□□□□ -1.7
LSM6Q06406 IDP1YDL066W 1287 nt4.4□□□□□ -1.71
LSM6Q06406 SCS7YMR272C 1155 nt4.4□□□□□ -1.71
LSM6Q06406 RCR1YBR005W 642 nt4.4□□□□□ -1.71
LSM6Q06406 ODC2YOR222W 924 nt4.4□□□□□ -1.71
LSM6Q06406 RFA1YAR007C 1866 nt4.4□□□□□ -1.71
LSM6Q06406 ERC1YHR032W 1746 nt4.4□□□□□ -1.71
LSM6Q06406 UBA1YKL210W 3075 nt4.39□□□□□ -1.71
LSM6Q06406 YNR040WYNR040W 771 nt4.39□□□□□ -1.71
LSM6Q06406 UBX2YML013W 1755 nt4.39□□□□□ -1.71
LSM6Q06406 CLP1YOR250C 1338 nt4.39□□□□□ -1.71
LSM6Q06406 YTP1YNL237W 1380 nt4.39□□□□□ -1.71
LSM6Q06406 ENT2YLR206W 1842 nt4.38□□□□□ -1.71
LSM6Q06406 ECM3YOR092W 1842 nt4.38□□□□□ -1.71
LSM6Q06406 YRB2YIL063C 984 nt4.38□□□□□ -1.71
LSM6Q06406 YMR119W-AYMR119W-A 375 nt4.38□□□□□ -1.71
LSM6Q06406 YCL049CYCL049C 939 nt4.38□□□□□ -1.71
LSM6Q06406 HSP78YDR258C 2436 nt4.38□□□□□ -1.71
LSM6Q06406 ASF2YDL197C 1578 nt4.38□□□□□ -1.71
LSM6Q06406 RET1YOR207C 3450 nt4.38□□□□□ -1.71
LSM6Q06406 YEH1YLL012W 1722 nt4.38□□□□□ -1.71
LSM6Q06406 NUP49YGL172W 1419 nt4.38□□□□□ -1.71
LSM6Q06406 IMA2YOL157C 1770 nt4.37□□□□□ -1.71
LSM6Q06406 GUD1YDL238C 1470 nt4.37□□□□□ -1.71
LSM6Q06406 ADE1YAR015W 921 nt4.37□□□□□ -1.71
LSM6Q06406 YLR162WYLR162W 357 nt4.37□□□□□ -1.71
LSM6Q06406 MRPL23YOR150W 492 nt4.37□□□□□ -1.71
LSM6Q06406 ABZ1YNR033W 2364 nt4.37□□□□□ -1.71
Retrieved 100 of 7,029 protein–RNA pairs in 8.2 ms