Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 YGL218WYGL218W 651 nt6.65□□□□□ -1.34
PUB1P32588 ERG20YJL167W 1059 nt6.65□□□□□ -1.34
PUB1P32588 YUH1YJR099W 711 nt6.65□□□□□ -1.34
PUB1P32588 YKL147CYKL147C 618 nt6.65□□□□□ -1.34
PUB1P32588 MTQ1YNL063W 945 nt6.65□□□□□ -1.34
PUB1P32588 ATO2YNR002C 849 nt6.65□□□□□ -1.34
PUB1P32588 YOR062CYOR062C 807 nt6.65□□□□□ -1.34
PUB1P32588 LIP5YOR196C 1245 nt6.65□□□□□ -1.34 RIP-Chip
PUB1P32588 YBR027CYBR027C 333 nt6.65□□□□□ -1.34 RIP-Chip
PUB1P32588 CBP6YBR120C 489 nt6.65□□□□□ -1.34
PUB1P32588 NSA1YGL111W 1392 nt6.65□□□□□ -1.35
PUB1P32588 ERP5YHR110W 639 nt6.64□□□□□ -1.35
PUB1P32588 EST3YIL009C-A 546 nt6.64□□□□□ -1.35
PUB1P32588 IRC9YJL142C 393 nt6.64□□□□□ -1.35
PUB1P32588 YAL064WYAL064W 285 nt6.64□□□□□ -1.35
PUB1P32588 YML090WYML090W 387 nt6.64□□□□□ -1.35
PUB1P32588 ELP4YPL101W 1371 nt6.64□□□□□ -1.35
PUB1P32588 ENB1YOL158C 1821 nt6.64□□□□□ -1.35 RIP-Chip
PUB1P32588 CTF18YMR078C 2226 nt6.64□□□□□ -1.35
PUB1P32588 RRP43YCR035C 1185 nt6.63□□□□□ -1.35
PUB1P32588 PRP9YDL030W 1593 nt6.63□□□□□ -1.35
PUB1P32588 BAP3YDR046C 1815 nt6.63□□□□□ -1.35
PUB1P32588 AFG3YER017C 2286 nt6.63□□□□□ -1.35
PUB1P32588 YFL012WYFL012W 447 nt6.63□□□□□ -1.35
PUB1P32588 tR(ACG)Q2tR(ACG)Q2 74 nt6.63□□□□□ -1.35
PUB1P32588 TAD2YJL035C 753 nt6.63□□□□□ -1.35
PUB1P32588 FCY2YER056C 1602 nt6.62□□□□□ -1.35 RIP-Chip
PUB1P32588 MFG1YDL233W 1377 nt6.62□□□□□ -1.35
PUB1P32588 YFH7YFR007W 1062 nt6.62□□□□□ -1.35
PUB1P32588 ORM1YGR038W 669 nt6.62□□□□□ -1.35 RIP-Chip
PUB1P32588 RUF20RUF20 443 nt6.62□□□□□ -1.35
PUB1P32588 YOL050CYOL050C 321 nt6.62□□□□□ -1.35 RIP-Chip
PUB1P32588 YOL162WYOL162W 648 nt6.62□□□□□ -1.35
PUB1P32588 RFS1YBR052C 633 nt6.62□□□□□ -1.35
PUB1P32588 BDS1YOL164W 1941 nt6.62□□□□□ -1.35 RIP-Chip
PUB1P32588 SSU1YPL092W 1377 nt6.61□□□□□ -1.35
PUB1P32588 YDR042CYDR042C 603 nt6.61□□□□□ -1.35
PUB1P32588 YDR336WYDR336W 945 nt6.61□□□□□ -1.35
PUB1P32588 YDR524W-CYDR524W-C 90 nt6.61□□□□□ -1.35
PUB1P32588 KSS1YGR040W 1107 nt6.61□□□□□ -1.35
PUB1P32588 YMR187CYMR187C 1296 nt6.61□□□□□ -1.35 RIP-Chip
PUB1P32588 VPS68YOL129W 555 nt6.61□□□□□ -1.35 RIP-Chip
PUB1P32588 LOA1YPR139C 903 nt6.61□□□□□ -1.35
PUB1P32588 TOS1YBR162C 1368 nt6.6□□□□□ -1.35 RIP-Chip
PUB1P32588 PPZ2YDR436W 2133 nt6.6□□□□□ -1.35
PUB1P32588 HPM1YIL110W 1134 nt6.6□□□□□ -1.35 RIP-Chip
PUB1P32588 YKR051WYKR051W 1257 nt6.6□□□□□ -1.35 RIP-Chip
PUB1P32588 LOT6YLR011W 576 nt6.6□□□□□ -1.35
PUB1P32588 YLR307C-AYLR307C-A 264 nt6.6□□□□□ -1.35
PUB1P32588 YNL217WYNL217W 981 nt6.6□□□□□ -1.35
PUB1P32588 YPR153WYPR153W 423 nt6.6□□□□□ -1.35 RIP-Chip
PUB1P32588 snR37snR37 386 nt6.6□□□□□ -1.35
PUB1P32588 YPT10YBR264C 600 nt6.6□□□□□ -1.35
PUB1P32588 DRN1YGR093W 1524 nt6.6□□□□□ -1.35
PUB1P32588 YFL052WYFL052W 1398 nt6.59□□□□□ -1.35
PUB1P32588 YDR124WYDR124W 975 nt6.59□□□□□ -1.35
PUB1P32588 MPM1YJL066C 759 nt6.59□□□□□ -1.35
PUB1P32588 MRPL49YJL096W 486 nt6.59□□□□□ -1.35
PUB1P32588 CMS1YLR003C 876 nt6.59□□□□□ -1.35
PUB1P32588 ADE1YAR015W 921 nt6.59□□□□□ -1.35
PUB1P32588 SCP1YOR367W 603 nt6.59□□□□□ -1.35
PUB1P32588 SPS1YDR523C 1473 nt6.59□□□□□ -1.36
PUB1P32588 MAS2YHR024C 1449 nt6.59□□□□□ -1.36 RIP-Chip
PUB1P32588 YCR041WYCR041W 333 nt6.58□□□□□ -1.36
PUB1P32588 PSA1YDL055C 1086 nt6.58□□□□□ -1.36
PUB1P32588 PCL2YDL127W 927 nt6.58□□□□□ -1.36 RIP-Chip
PUB1P32588 SNF4YGL115W 969 nt6.58□□□□□ -1.36
PUB1P32588 YHR112CYHR112C 1137 nt6.58□□□□□ -1.36
PUB1P32588 RHO3YIL118W 696 nt6.58□□□□□ -1.36 RIP-Chip
PUB1P32588 YAL026C-AYAL026C-A 438 nt6.58□□□□□ -1.36
PUB1P32588 RRP36YOR287C 903 nt6.58□□□□□ -1.36
PUB1P32588 UBP8YMR223W 1416 nt6.58□□□□□ -1.36
PUB1P32588 CHL4YDR254W 1377 nt6.57□□□□□ -1.36
PUB1P32588 YFT2YDR319C 825 nt6.57□□□□□ -1.36 RIP-Chip
PUB1P32588 YGL235WYGL235W 537 nt6.57□□□□□ -1.36
PUB1P32588 BLS1YLR408C 369 nt6.57□□□□□ -1.36
PUB1P32588 JNM1YMR294W 1122 nt6.57□□□□□ -1.36
PUB1P32588 HRT1YOL133W 366 nt6.57□□□□□ -1.36 RIP-Chip
PUB1P32588 POC4YPL144W 447 nt6.57□□□□□ -1.36
PUB1P32588 IFA38YBR159W 1044 nt6.57□□□□□ -1.36
PUB1P32588 PSP2YML017W 1782 nt6.57□□□□□ -1.36 RIP-Chip
PUB1P32588 CDC3YLR314C 1563 nt6.57□□□□□ -1.36
PUB1P32588 YPL245WYPL245W 1365 nt6.57□□□□□ -1.36
PUB1P32588 YEA6YEL006W 1008 nt6.56□□□□□ -1.36
PUB1P32588 DUO1YGL061C 744 nt6.56□□□□□ -1.36
PUB1P32588 YGR068W-AYGR068W-A 96 nt6.56□□□□□ -1.36
PUB1P32588 COG2YGR120C 789 nt6.56□□□□□ -1.36
PUB1P32588 YGR291CYGR291C 222 nt6.56□□□□□ -1.36
PUB1P32588 YLR222C-AYLR222C-A 231 nt6.56□□□□□ -1.36
PUB1P32588 YML094C-AYML094C-A 402 nt6.56□□□□□ -1.36
PUB1P32588 NSG2YNL156C 900 nt6.56□□□□□ -1.36 RIP-Chip
PUB1P32588 BUD21YOR078W 645 nt6.56□□□□□ -1.36
PUB1P32588 DSC3YOR223W 879 nt6.56□□□□□ -1.36 RIP-Chip
PUB1P32588 YBR298C-AYBR298C-A 222 nt6.56□□□□□ -1.36
PUB1P32588 PNS1YOR161C 1620 nt6.56□□□□□ -1.36 RIP-Chip
PUB1P32588 SPO77YLR341W 1434 nt6.56□□□□□ -1.36
PUB1P32588 MST1YKL194C 1389 nt6.56□□□□□ -1.36
PUB1P32588 EXG2YDR261C 1689 nt6.55□□□□□ -1.36
PUB1P32588 CLD1YGR110W 1338 nt6.55□□□□□ -1.36
PUB1P32588 YLR365WYLR365W 333 nt6.55□□□□□ -1.36
Retrieved 100 of 7,029 protein–RNA pairs in 100.8 ms