Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 NSE5YML023C 1671 nt6.85□□□□□ -1.31
MSH1P25846 DID2YKR035W-A 615 nt6.85□□□□□ -1.31
MSH1P25846 HTZ1YOL012C 405 nt6.85□□□□□ -1.31
MSH1P25846 YOR111WYOR111W 699 nt6.85□□□□□ -1.31
MSH1P25846 DAL4YIR028W 1908 nt6.85□□□□□ -1.31
MSH1P25846 DRS1YLL008W 2259 nt6.85□□□□□ -1.31
MSH1P25846 DOT1YDR440W 1749 nt6.84□□□□□ -1.31
MSH1P25846 HRQ1YDR291W 3234 nt6.84□□□□□ -1.31
MSH1P25846 PDA1YER178W 1263 nt6.84□□□□□ -1.31
MSH1P25846 COS6YGR295C 1146 nt6.84□□□□□ -1.31
MSH1P25846 YML083CYML083C 1257 nt6.84□□□□□ -1.31
MSH1P25846 COQ3YOL096C 939 nt6.84□□□□□ -1.31
MSH1P25846 YPR076WYPR076W 375 nt6.84□□□□□ -1.31
MSH1P25846 YCL049CYCL049C 939 nt6.84□□□□□ -1.31
MSH1P25846 HAS1YMR290C 1518 nt6.84□□□□□ -1.31
MSH1P25846 DMA1YHR115C 1251 nt6.83□□□□□ -1.32
MSH1P25846 YHR140WYHR140W 720 nt6.83□□□□□ -1.32
MSH1P25846 AIM24YJR080C 1185 nt6.83□□□□□ -1.32
MSH1P25846 OGG1YML060W 1131 nt6.83□□□□□ -1.32
MSH1P25846 HXK2YGL253W 1461 nt6.83□□□□□ -1.32
MSH1P25846 YJL163CYJL163C 1668 nt6.83□□□□□ -1.32
MSH1P25846 MRPL1YDR116C 858 nt6.82□□□□□ -1.32
MSH1P25846 PRI1YIR008C 1230 nt6.82□□□□□ -1.32
MSH1P25846 RKI1YOR095C 777 nt6.82□□□□□ -1.32
MSH1P25846 VPS5YOR069W 2028 nt6.82□□□□□ -1.32
MSH1P25846 COX15YER141W 1461 nt6.81□□□□□ -1.32
MSH1P25846 YJR146WYJR146W 354 nt6.81□□□□□ -1.32
MSH1P25846 RPS28AYOR167C 204 nt6.81□□□□□ -1.32
MSH1P25846 DPB2YPR175W 2070 nt6.81□□□□□ -1.32
MSH1P25846 ICP55YER078C 1536 nt6.81□□□□□ -1.32
MSH1P25846 MPH3YJR160C 1809 nt6.8□□□□□ -1.32
MSH1P25846 YOL036WYOL036W 2286 nt6.8□□□□□ -1.32
MSH1P25846 THI4YGR144W 981 nt6.8□□□□□ -1.32
MSH1P25846 BIO3YNR058W 1443 nt6.8□□□□□ -1.32
MSH1P25846 FIT2YOR382W 462 nt6.8□□□□□ -1.32
MSH1P25846 GAA1YLR088W 1845 nt6.8□□□□□ -1.32
MSH1P25846 CYS4YGR155W 1524 nt6.8□□□□□ -1.32
MSH1P25846 YML133CYML133C 4125 nt6.8□□□□□ -1.32
MSH1P25846 APE4YHR113W 1473 nt6.79□□□□□ -1.32
MSH1P25846 YFL042CYFL042C 2025 nt6.79□□□□□ -1.32
MSH1P25846 HOC1YJR075W 1191 nt6.79□□□□□ -1.32
MSH1P25846 LDB7YBL006C 543 nt6.79□□□□□ -1.32
MSH1P25846 YNL092WYNL092W 1203 nt6.79□□□□□ -1.32
MSH1P25846 YOL046CYOL046C 675 nt6.79□□□□□ -1.32
MSH1P25846 TMA46YOR091W 1038 nt6.79□□□□□ -1.32
MSH1P25846 MSC3YLR219W 2187 nt6.78□□□□□ -1.32
MSH1P25846 TRP1YDR007W 675 nt6.78□□□□□ -1.32
MSH1P25846 YDR278CYDR278C 318 nt6.78□□□□□ -1.32
MSH1P25846 RFC4YOL094C 972 nt6.78□□□□□ -1.32
MSH1P25846 PAT1YCR077C 2391 nt6.77□□□□□ -1.32
MSH1P25846 SKI2YLR398C 3864 nt6.77□□□□□ -1.32
MSH1P25846 CDC10YCR002C 969 nt6.77□□□□□ -1.33
MSH1P25846 PPH21YDL134C 1110 nt6.77□□□□□ -1.33
MSH1P25846 QCR8YJL166W 285 nt6.77□□□□□ -1.33
MSH1P25846 LIA1YJR070C 978 nt6.77□□□□□ -1.33
MSH1P25846 IVY1YDR229W 1362 nt6.77□□□□□ -1.33
MSH1P25846 ATF1YOR377W 1578 nt6.77□□□□□ -1.33
MSH1P25846 APM4YOL062C 1476 nt6.76□□□□□ -1.33
MSH1P25846 MPA43YNL249C 1629 nt6.76□□□□□ -1.33
MSH1P25846 PEX3YDR329C 1326 nt6.76□□□□□ -1.33
MSH1P25846 IES1YFL013C 2079 nt6.75□□□□□ -1.33
MSH1P25846 GPD1YDL022W 1176 nt6.75□□□□□ -1.33
MSH1P25846 IME2YJL106W 1938 nt6.75□□□□□ -1.33
MSH1P25846 FRE5YOR384W 2085 nt6.75□□□□□ -1.33
MSH1P25846 PAP2YOL115W 1755 nt6.74□□□□□ -1.33
MSH1P25846 CLB2YPR119W 1476 nt6.74□□□□□ -1.33
MSH1P25846 CDS1YBR029C 1374 nt6.74□□□□□ -1.33
MSH1P25846 YPR123CYPR123C 435 nt6.74□□□□□ -1.33
MSH1P25846 MSS116YDR194C 1995 nt6.74□□□□□ -1.33
MSH1P25846 PTK2YJR059W 2457 nt6.74□□□□□ -1.33
MSH1P25846 VPS4YPR173C 1314 nt6.74□□□□□ -1.33
MSH1P25846 GYP8YFL027C 1494 nt6.73□□□□□ -1.33
MSH1P25846 YFR006WYFR006W 1608 nt6.73□□□□□ -1.33
MSH1P25846 AGX1YFL030W 1158 nt6.73□□□□□ -1.33
MSH1P25846 OCA1YNL099C 717 nt6.73□□□□□ -1.33
MSH1P25846 IES2YNL215W 963 nt6.73□□□□□ -1.33
MSH1P25846 ASR1YPR093C 867 nt6.73□□□□□ -1.33
MSH1P25846 PAP1YKR002W 1707 nt6.73□□□□□ -1.33
MSH1P25846 AMA1YGR225W 1782 nt6.72□□□□□ -1.33
MSH1P25846 TMT1YER175C 900 nt6.72□□□□□ -1.33
MSH1P25846 YLL056CYLL056C 897 nt6.72□□□□□ -1.33
MSH1P25846 SCO2YBR024W 906 nt6.72□□□□□ -1.33
MSH1P25846 CNM67YNL225C 1746 nt6.72□□□□□ -1.33
MSH1P25846 ARO10YDR380W 1908 nt6.72□□□□□ -1.33
MSH1P25846 SIR2YDL042C 1689 nt6.71□□□□□ -1.33
MSH1P25846 CNE1YAL058W 1509 nt6.71□□□□□ -1.33
MSH1P25846 MKK1YOR231W 1527 nt6.71□□□□□ -1.33
MSH1P25846 MRPL19YNL185C 477 nt6.71□□□□□ -1.34
MSH1P25846 FMP40YPL222W 2067 nt6.7□□□□□ -1.34
MSH1P25846 ERP5YHR110W 639 nt6.7□□□□□ -1.34
MSH1P25846 HOS2YGL194C 1359 nt6.69□□□□□ -1.34
MSH1P25846 COX10YPL172C 1389 nt6.69□□□□□ -1.34
MSH1P25846 JIP4YDR475C 2631 nt6.69□□□□□ -1.34
MSH1P25846 MRPL35YDR322W 1104 nt6.69□□□□□ -1.34
MSH1P25846 CDC11YJR076C 1248 nt6.69□□□□□ -1.34
MSH1P25846 YKL018C-AYKL018C-A 300 nt6.69□□□□□ -1.34
MSH1P25846 CBT1YKL208W 816 nt6.69□□□□□ -1.34
MSH1P25846 SRY1YKL218C 981 nt6.69□□□□□ -1.34
MSH1P25846 RPL21AYBR191W 483 nt6.69□□□□□ -1.34
MSH1P25846 PGK1YCR012W 1251 nt6.68□□□□□ -1.34
Retrieved 100 of 7,029 protein–RNA pairs in 15.2 ms