Protein–RNA interactions for Protein: P25655

CDC39, General negative regulator of transcription subunit 1, yeastyeast

Known RBP Predictions only

Length 2,108 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC39P25655 YDR278CYDR278C 318 nt5.44□□□□□ -1.54
CDC39P25655 SRL2YLR082C 1179 nt5.44□□□□□ -1.54
CDC39P25655 PHO3YBR092C 1404 nt5.44□□□□□ -1.54
CDC39P25655 YOL036WYOL036W 2286 nt5.44□□□□□ -1.54
CDC39P25655 TOS2YGR221C 1869 nt5.43□□□□□ -1.54
CDC39P25655 MTF2YDL044C 1323 nt5.43□□□□□ -1.54
CDC39P25655 AVT4YNL101W 2142 nt5.43□□□□□ -1.54
CDC39P25655 BUG1YDL099W 1026 nt5.43□□□□□ -1.54
CDC39P25655 SUR7YML052W 909 nt5.43□□□□□ -1.54
CDC39P25655 DFM1YDR411C 1026 nt5.42□□□□□ -1.54
CDC39P25655 PGM1YKL127W 1713 nt5.42□□□□□ -1.54
CDC39P25655 PYC2YBR218C 3543 nt5.42□□□□□ -1.54
CDC39P25655 YJL045WYJL045W 1905 nt5.42□□□□□ -1.54
CDC39P25655 YHR213W-AYHR213W-A 234 nt5.42□□□□□ -1.54
CDC39P25655 MEU1YLR017W 1014 nt5.42□□□□□ -1.54
CDC39P25655 MDM31YHR194W 1740 nt5.41□□□□□ -1.54
CDC39P25655 BUD32YGR262C 786 nt5.41□□□□□ -1.54
CDC39P25655 YIR042CYIR042C 711 nt5.41□□□□□ -1.54
CDC39P25655 CCC2YDR270W 3015 nt5.41□□□□□ -1.54
CDC39P25655 YNL042W-BYNL042W-B 258 nt5.41□□□□□ -1.54
CDC39P25655 CTF19YPL018W 1110 nt5.41□□□□□ -1.54
CDC39P25655 MRP17YKL003C 396 nt5.4□□□□□ -1.54
CDC39P25655 ICL2YPR006C 1728 nt5.4□□□□□ -1.55
CDC39P25655 TIM22YDL217C 624 nt5.39□□□□□ -1.55
CDC39P25655 YNL120CYNL120C 486 nt5.39□□□□□ -1.55
CDC39P25655 ATG12YBR217W 561 nt5.39□□□□□ -1.55
CDC39P25655 ARG81YML099C 2643 nt5.39□□□□□ -1.55
CDC39P25655 QCR6YFR033C 444 nt5.39□□□□□ -1.55
CDC39P25655 TSR3YOR006C 942 nt5.39□□□□□ -1.55
CDC39P25655 MAK31YCR020C-A 267 nt5.38□□□□□ -1.55
CDC39P25655 VPS61YDR136C 573 nt5.38□□□□□ -1.55
CDC39P25655 LCB3YJL134W 1230 nt5.38□□□□□ -1.55
CDC39P25655 RPE1YJL121C 717 nt5.38□□□□□ -1.55
CDC39P25655 QCR8YJL166W 285 nt5.38□□□□□ -1.55
CDC39P25655 THI2YBR240C 1353 nt5.37□□□□□ -1.55
CDC39P25655 ILV1YER086W 1731 nt5.37□□□□□ -1.55
CDC39P25655 YHL017WYHL017W 1599 nt5.37□□□□□ -1.55
CDC39P25655 ICL1YER065C 1674 nt5.37□□□□□ -1.55
CDC39P25655 BDF2YDL070W 1917 nt5.36□□□□□ -1.55
CDC39P25655 PFK2YMR205C 2880 nt5.36□□□□□ -1.55
CDC39P25655 POP5YAL033W 522 nt5.36□□□□□ -1.55
CDC39P25655 RPL21AYBR191W 483 nt5.36□□□□□ -1.55
CDC39P25655 DOT5YIL010W 648 nt5.36□□□□□ -1.55
CDC39P25655 COX5AYNL052W 462 nt5.36□□□□□ -1.55
CDC39P25655 CYC8YBR112C 2901 nt5.35□□□□□ -1.55
CDC39P25655 PEX13YLR191W 1161 nt5.35□□□□□ -1.55
CDC39P25655 DAP1YPL170W 459 nt5.35□□□□□ -1.55
CDC39P25655 YCR061WYCR061W 1896 nt5.35□□□□□ -1.55
CDC39P25655 YGL235WYGL235W 537 nt5.34□□□□□ -1.55
CDC39P25655 YJR084WYJR084W 1272 nt5.34□□□□□ -1.55
CDC39P25655 GTO3YMR251W 1101 nt5.34□□□□□ -1.55
CDC39P25655 HRQ1YDR291W 3234 nt5.34□□□□□ -1.55
CDC39P25655 POX1YGL205W 2247 nt5.34□□□□□ -1.55
CDC39P25655 PET112YBL080C 1626 nt5.34□□□□□ -1.55
CDC39P25655 GUT1YHL032C 2130 nt5.33□□□□□ -1.56
CDC39P25655 COX20YDR231C 618 nt5.33□□□□□ -1.56
CDC39P25655 tR(ACG)DtR(ACG)D 73 nt5.33□□□□□ -1.56
CDC39P25655 tR(ACG)EtR(ACG)E 73 nt5.33□□□□□ -1.56
CDC39P25655 tR(ACG)KtR(ACG)K 73 nt5.33□□□□□ -1.56
CDC39P25655 tR(ACG)LtR(ACG)L 73 nt5.33□□□□□ -1.56
CDC39P25655 tR(ACG)OtR(ACG)O 73 nt5.33□□□□□ -1.56
CDC39P25655 FRE5YOR384W 2085 nt5.33□□□□□ -1.56
CDC39P25655 YJR154WYJR154W 1041 nt5.32□□□□□ -1.56
CDC39P25655 JNM1YMR294W 1122 nt5.32□□□□□ -1.56
CDC39P25655 SNN1YNL086W 309 nt5.32□□□□□ -1.56
CDC39P25655 ARG1YOL058W 1263 nt5.32□□□□□ -1.56
CDC39P25655 ARR3YPR201W 1215 nt5.32□□□□□ -1.56
CDC39P25655 TKL2YBR117C 2046 nt5.32□□□□□ -1.56
CDC39P25655 AGP2YBR132C 1791 nt5.31□□□□□ -1.56
CDC39P25655 YBR284WYBR284W 2394 nt5.31□□□□□ -1.56
CDC39P25655 GEF1YJR040W 2340 nt5.31□□□□□ -1.56
CDC39P25655 SEC20YDR498C 1152 nt5.3□□□□□ -1.56
CDC39P25655 AAT2YLR027C 1257 nt5.3□□□□□ -1.56
CDC39P25655 SSP120YLR250W 705 nt5.3□□□□□ -1.56
CDC39P25655 YPR160C-AYPR160C-A 285 nt5.3□□□□□ -1.56
CDC39P25655 FPR2YDR519W 408 nt5.29□□□□□ -1.56
CDC39P25655 RPS5YJR123W 678 nt5.29□□□□□ -1.56
CDC39P25655 ARA2YMR041C 1008 nt5.29□□□□□ -1.56
CDC39P25655 MRPS16YPL013C 366 nt5.29□□□□□ -1.56
CDC39P25655 LAG2YOL025W 1983 nt5.29□□□□□ -1.56
CDC39P25655 SES1YDR023W 1389 nt5.29□□□□□ -1.56
CDC39P25655 RGT2YDL138W 2292 nt5.29□□□□□ -1.56
CDC39P25655 RPN11YFR004W 921 nt5.29□□□□□ -1.56
CDC39P25655 DMA1YHR115C 1251 nt5.29□□□□□ -1.56
CDC39P25655 YMR119W-AYMR119W-A 375 nt5.29□□□□□ -1.56
CDC39P25655 WHI2YOR043W 1461 nt5.28□□□□□ -1.56
CDC39P25655 PYK2YOR347C 1521 nt5.28□□□□□ -1.56
CDC39P25655 HDA1YNL021W 2121 nt5.28□□□□□ -1.56
CDC39P25655 YEL068CYEL068C 333 nt5.28□□□□□ -1.56
CDC39P25655 KKQ8YKL168C 2175 nt5.28□□□□□ -1.56
CDC39P25655 GYP8YFL027C 1494 nt5.27□□□□□ -1.57
CDC39P25655 ISN1YOR155C 1353 nt5.27□□□□□ -1.57
CDC39P25655 GPI11YDR302W 660 nt5.27□□□□□ -1.57
CDC39P25655 YNL200CYNL200C 741 nt5.27□□□□□ -1.57
CDC39P25655 AAD15YOL165C 432 nt5.27□□□□□ -1.57
CDC39P25655 HST3YOR025W 1344 nt5.27□□□□□ -1.57
CDC39P25655 ADE12YNL220W 1302 nt5.27□□□□□ -1.57
CDC39P25655 UGX2YDL169C 672 nt5.26□□□□□ -1.57
CDC39P25655 YPR114WYPR114W 948 nt5.26□□□□□ -1.57
CDC39P25655 KTR3YBR205W 1215 nt5.26□□□□□ -1.57
Retrieved 100 of 7,029 protein–RNA pairs in 11.8 ms