Protein–RNA interactions for Protein: P0CX27

RPL42A, 60S ribosomal protein L42-A, yeastyeast

Known RBP Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL42AP0CX27 tL(UAA)B2tL(UAA)B2 84 nt5.09□□□□□ -1.59
RPL42AP0CX27 tL(UAA)DtL(UAA)D 84 nt5.09□□□□□ -1.59
RPL42AP0CX27 SUP51tL(UAA)J 84 nt5.09□□□□□ -1.59
RPL42AP0CX27 tL(UAA)KtL(UAA)K 84 nt5.09□□□□□ -1.59
RPL42AP0CX27 tL(UAA)LtL(UAA)L 84 nt5.09□□□□□ -1.59
RPL42AP0CX27 tL(UAA)NtL(UAA)N 84 nt5.09□□□□□ -1.59
RPL42AP0CX27 YSC83YHR017W 1158 nt5.09□□□□□ -1.59
RPL42AP0CX27 YJR107WYJR107W 987 nt5.09□□□□□ -1.59
RPL42AP0CX27 SPG5YMR191W 1122 nt5.09□□□□□ -1.59
RPL42AP0CX27 NTG2YOL043C 1143 nt5.09□□□□□ -1.59
RPL42AP0CX27 YPL168WYPL168W 1293 nt5.09□□□□□ -1.59
RPL42AP0CX27 YNL247WYNL247W 2304 nt5.09□□□□□ -1.59
RPL42AP0CX27 NSE5YML023C 1671 nt5.08□□□□□ -1.6
RPL42AP0CX27 MST1YKL194C 1389 nt5.08□□□□□ -1.6
RPL42AP0CX27 MPC54YOR177C 1395 nt5.08□□□□□ -1.6
RPL42AP0CX27 YDL129WYDL129W 876 nt5.08□□□□□ -1.6
RPL42AP0CX27 MAF1YDR005C 1188 nt5.08□□□□□ -1.6
RPL42AP0CX27 SUF5tG(CCC)O 72 nt5.08□□□□□ -1.6
RPL42AP0CX27 QCR6YFR033C 444 nt5.08□□□□□ -1.6
RPL42AP0CX27 DYS1YHR068W 1164 nt5.08□□□□□ -1.6
RPL42AP0CX27 YJR056CYJR056C 711 nt5.08□□□□□ -1.6
RPL42AP0CX27 YLR358CYLR358C 564 nt5.08□□□□□ -1.6
RPL42AP0CX27 YGP1YNL160W 1065 nt5.08□□□□□ -1.6
RPL42AP0CX27 TSR3YOR006C 942 nt5.08□□□□□ -1.6
RPL42AP0CX27 CYC8YBR112C 2901 nt5.08□□□□□ -1.6
RPL42AP0CX27 YEN1YER041W 2280 nt5.08□□□□□ -1.6
RPL42AP0CX27 IME2YJL106W 1938 nt5.07□□□□□ -1.6
RPL42AP0CX27 PHO3YBR092C 1404 nt5.07□□□□□ -1.6
RPL42AP0CX27 IMG2YCR071C 441 nt5.07□□□□□ -1.6
RPL42AP0CX27 YDR415CYDR415C 1125 nt5.07□□□□□ -1.6
RPL42AP0CX27 AAD6YFL056C 639 nt5.07□□□□□ -1.6
RPL42AP0CX27 REC107YJR021C 945 nt5.07□□□□□ -1.6
RPL42AP0CX27 PEX22YAL055W 543 nt5.07□□□□□ -1.6
RPL42AP0CX27 YNL200CYNL200C 741 nt5.07□□□□□ -1.6
RPL42AP0CX27 HTZ1YOL012C 405 nt5.07□□□□□ -1.6
RPL42AP0CX27 MED4YOR174W 855 nt5.07□□□□□ -1.6
RPL42AP0CX27 LPL1YOR059C 1353 nt5.06□□□□□ -1.6
RPL42AP0CX27 VPS72YDR485C 2388 nt5.06□□□□□ -1.6
RPL42AP0CX27 SOD2YHR008C 702 nt5.06□□□□□ -1.6
RPL42AP0CX27 CBR1YIL043C 855 nt5.06□□□□□ -1.6
RPL42AP0CX27 YLR036CYLR036C 612 nt5.06□□□□□ -1.6
RPL42AP0CX27 RPL31BYLR406C 342 nt5.06□□□□□ -1.6
RPL42AP0CX27 TOS6YNL300W 309 nt5.06□□□□□ -1.6
RPL42AP0CX27 YNR005CYNR005C 405 nt5.06□□□□□ -1.6
RPL42AP0CX27 CEF1YMR213W 1773 nt5.06□□□□□ -1.6
RPL42AP0CX27 DEF1YKL054C 2217 nt5.05□□□□□ -1.6
RPL42AP0CX27 DAL4YIR028W 1908 nt5.05□□□□□ -1.6
RPL42AP0CX27 ATG32YIL146C 1590 nt5.05□□□□□ -1.6
RPL42AP0CX27 ATG36YJL185C 882 nt5.05□□□□□ -1.6
RPL42AP0CX27 JJJ3YJR097W 519 nt5.05□□□□□ -1.6
RPL42AP0CX27 YLR311CYLR311C 348 nt5.05□□□□□ -1.6
RPL42AP0CX27 AIM33YML087C 939 nt5.05□□□□□ -1.6
RPL42AP0CX27 RRP40YOL142W 723 nt5.05□□□□□ -1.6
RPL42AP0CX27 YPR130CYPR130C 408 nt5.05□□□□□ -1.6
RPL42AP0CX27 MMR1YLR190W 1476 nt5.05□□□□□ -1.6
RPL42AP0CX27 CIR2YOR356W 1896 nt5.05□□□□□ -1.6
RPL42AP0CX27 PPM2YOL141W 2088 nt5.04□□□□□ -1.6
RPL42AP0CX27 AIM17YHL021C 1398 nt5.04□□□□□ -1.6
RPL42AP0CX27 WTM1YOR230W 1314 nt5.04□□□□□ -1.6
RPL42AP0CX27 tG(GCC)BtG(GCC)B 71 nt5.04□□□□□ -1.6
RPL42AP0CX27 SUF16tG(GCC)C 71 nt5.04□□□□□ -1.6
RPL42AP0CX27 tG(GCC)D1tG(GCC)D1 71 nt5.04□□□□□ -1.6
RPL42AP0CX27 tG(GCC)D2tG(GCC)D2 71 nt5.04□□□□□ -1.6
RPL42AP0CX27 tG(GCC)EtG(GCC)E 71 nt5.04□□□□□ -1.6
RPL42AP0CX27 SUF20tG(GCC)F1 71 nt5.04□□□□□ -1.6
RPL42AP0CX27 tG(GCC)F2tG(GCC)F2 71 nt5.04□□□□□ -1.6
RPL42AP0CX27 tG(GCC)G1tG(GCC)G1 71 nt5.04□□□□□ -1.6
RPL42AP0CX27 tG(GCC)G2tG(GCC)G2 71 nt5.04□□□□□ -1.6
RPL42AP0CX27 tG(GCC)J1tG(GCC)J1 71 nt5.04□□□□□ -1.6
RPL42AP0CX27 SUF23tG(GCC)J2 71 nt5.04□□□□□ -1.6
RPL42AP0CX27 tG(GCC)MtG(GCC)M 71 nt5.04□□□□□ -1.6
RPL42AP0CX27 tG(GCC)O1tG(GCC)O1 71 nt5.04□□□□□ -1.6
RPL42AP0CX27 SUF17tG(GCC)O2 71 nt5.04□□□□□ -1.6
RPL42AP0CX27 tG(GCC)P1tG(GCC)P1 71 nt5.04□□□□□ -1.6
RPL42AP0CX27 tG(GCC)P2tG(GCC)P2 71 nt5.04□□□□□ -1.6
RPL42AP0CX27 RIB1YBL033C 1038 nt5.04□□□□□ -1.6
RPL42AP0CX27 RDL1YOR285W 420 nt5.04□□□□□ -1.6
RPL42AP0CX27 YHR020WYHR020W 2067 nt5.04□□□□□ -1.6
RPL42AP0CX27 SES1YDR023W 1389 nt5.04□□□□□ -1.6
RPL42AP0CX27 JIP4YDR475C 2631 nt5.03□□□□□ -1.6
RPL42AP0CX27 KNS1YLL019C 2214 nt5.03□□□□□ -1.6
RPL42AP0CX27 CIA1YDR267C 993 nt5.03□□□□□ -1.6
RPL42AP0CX27 MRPS28YDR337W 861 nt5.03□□□□□ -1.6
RPL42AP0CX27 LSM6YDR378C 261 nt5.03□□□□□ -1.6
RPL42AP0CX27 YPT1YFL038C 621 nt5.03□□□□□ -1.6
RPL42AP0CX27 YJU2YKL095W 837 nt5.03□□□□□ -1.6
RPL42AP0CX27 MFA2YNL145W 117 nt5.03□□□□□ -1.6
RPL42AP0CX27 TMA46YOR091W 1038 nt5.03□□□□□ -1.6
RPL42AP0CX27 AME1YBR211C 975 nt5.03□□□□□ -1.6
RPL42AP0CX27 DHH1YDL160C 1521 nt5.02□□□□□ -1.61
RPL42AP0CX27 APE4YHR113W 1473 nt5.02□□□□□ -1.61
RPL42AP0CX27 NAF1YNL124W 1479 nt5.02□□□□□ -1.61
RPL42AP0CX27 PEX7YDR142C 1128 nt5.02□□□□□ -1.61
RPL42AP0CX27 MCM21YDR318W 1107 nt5.02□□□□□ -1.61
RPL42AP0CX27 PTH2YBL057C 627 nt5.02□□□□□ -1.61
RPL42AP0CX27 COX5AYNL052W 462 nt5.02□□□□□ -1.61
RPL42AP0CX27 YOL024WYOL024W 519 nt5.02□□□□□ -1.61
RPL42AP0CX27 RAD17YOR368W 1206 nt5.02□□□□□ -1.61
RPL42AP0CX27 YBR113WYBR113W 483 nt5.02□□□□□ -1.61
RPL42AP0CX27 TAH18YPR048W 1872 nt5.02□□□□□ -1.61
Retrieved 100 of 7,029 protein–RNA pairs in 31.9 ms