Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TOMM40O96008 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC18.86■□□□□ 0.61
TOMM40O96008 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC18.86■□□□□ 0.61
TOMM40O96008 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TOMM40O96008 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.86■□□□□ 0.61
TOMM40O96008 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.86■□□□□ 0.61
TOMM40O96008 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TOMM40O96008 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TOMM40O96008 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.86■□□□□ 0.61
TOMM40O96008 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC18.85■□□□□ 0.61
TOMM40O96008 ERN1-208ENST00000606895 2068 ntBASIC18.85■□□□□ 0.61
TOMM40O96008 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TOMM40O96008 AC093323.1-202ENST00000635031 2045 ntBASIC18.84■□□□□ 0.61
TOMM40O96008 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TOMM40O96008 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
TOMM40O96008 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TOMM40O96008 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TOMM40O96008 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
TOMM40O96008 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TOMM40O96008 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
TOMM40O96008 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TOMM40O96008 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TOMM40O96008 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TOMM40O96008 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
TOMM40O96008 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TOMM40O96008 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TOMM40O96008 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TOMM40O96008 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TOMM40O96008 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TOMM40O96008 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TOMM40O96008 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC18.82■□□□□ 0.6
TOMM40O96008 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TOMM40O96008 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TOMM40O96008 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TOMM40O96008 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC18.82■□□□□ 0.6
TOMM40O96008 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TOMM40O96008 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
TOMM40O96008 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TOMM40O96008 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TOMM40O96008 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TOMM40O96008 CR559946.2-201ENST00000623684 991 ntBASIC18.8■□□□□ 0.6
TOMM40O96008 AL359504.2-201ENST00000605506 1601 ntBASIC18.8■□□□□ 0.6
TOMM40O96008 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TOMM40O96008 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TOMM40O96008 AC126177.7-201ENST00000547904 679 ntBASIC18.79■□□□□ 0.6
TOMM40O96008 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TOMM40O96008 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TOMM40O96008 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.78■□□□□ 0.6
TOMM40O96008 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TOMM40O96008 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC18.78■□□□□ 0.6
TOMM40O96008 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC18.78■□□□□ 0.6
TOMM40O96008 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TOMM40O96008 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TOMM40O96008 ABHD17AP4-201ENST00000411545 909 ntBASIC18.77■□□□□ 0.6
TOMM40O96008 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC18.77■□□□□ 0.6
TOMM40O96008 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TOMM40O96008 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC18.76■□□□□ 0.59
TOMM40O96008 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TOMM40O96008 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
TOMM40O96008 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC18.76■□□□□ 0.59
TOMM40O96008 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TOMM40O96008 MED25-210ENST00000612854 801 ntTSL 5 BASIC18.76■□□□□ 0.59
TOMM40O96008 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TOMM40O96008 MED25-214ENST00000622402 642 ntTSL 5 BASIC18.76■□□□□ 0.59
TOMM40O96008 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TOMM40O96008 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TOMM40O96008 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.76■□□□□ 0.59
TOMM40O96008 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TOMM40O96008 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TOMM40O96008 MACF1-219ENST00000484793 834 ntTSL 2 BASIC18.75■□□□□ 0.59
TOMM40O96008 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TOMM40O96008 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
TOMM40O96008 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TOMM40O96008 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TOMM40O96008 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TOMM40O96008 CEBPA-AS1-201ENST00000592982 2198 ntBASIC18.75■□□□□ 0.59
TOMM40O96008 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TOMM40O96008 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TOMM40O96008 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TOMM40O96008 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC18.74■□□□□ 0.59
TOMM40O96008 MIR3648-2-201ENST00000581792 180 ntBASIC18.74■□□□□ 0.59
TOMM40O96008 MIR3648-1-201ENST00000615959 180 ntBASIC18.74■□□□□ 0.59
TOMM40O96008 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TOMM40O96008 GDI1-215ENST00000630693 786 ntTSL 4 BASIC18.74■□□□□ 0.59
TOMM40O96008 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TOMM40O96008 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TOMM40O96008 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TOMM40O96008 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.73■□□□□ 0.59
TOMM40O96008 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
TOMM40O96008 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TOMM40O96008 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TOMM40O96008 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TOMM40O96008 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TOMM40O96008 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TOMM40O96008 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC18.72■□□□□ 0.59
TOMM40O96008 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TOMM40O96008 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TOMM40O96008 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TOMM40O96008 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TOMM40O96008 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms