Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA11Q9Y5H2 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA11Q9Y5H2 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA11Q9Y5H2 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA11Q9Y5H2 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA11Q9Y5H2 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA11Q9Y5H2 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHGA11Q9Y5H2 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA11Q9Y5H2 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA11Q9Y5H2 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.76■□□□□ 0.27
PCDHGA11Q9Y5H2 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.76■□□□□ 0.27
PCDHGA11Q9Y5H2 AC114341.1-201ENST00000618070 349 ntBASIC16.76■□□□□ 0.27
PCDHGA11Q9Y5H2 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHGA11Q9Y5H2 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA11Q9Y5H2 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PCDHGA11Q9Y5H2 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
PCDHGA11Q9Y5H2 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
PCDHGA11Q9Y5H2 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA11Q9Y5H2 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA11Q9Y5H2 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA11Q9Y5H2 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
PCDHGA11Q9Y5H2 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
PCDHGA11Q9Y5H2 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PCDHGA11Q9Y5H2 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA11Q9Y5H2 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
PCDHGA11Q9Y5H2 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
PCDHGA11Q9Y5H2 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA11Q9Y5H2 AC093525.9-201ENST00000624961 1746 ntBASIC16.76■□□□□ 0.27
PCDHGA11Q9Y5H2 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA11Q9Y5H2 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA11Q9Y5H2 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PCDHGA11Q9Y5H2 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDHGA11Q9Y5H2 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDHGA11Q9Y5H2 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.75■□□□□ 0.27
PCDHGA11Q9Y5H2 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA11Q9Y5H2 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA11Q9Y5H2 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PCDHGA11Q9Y5H2 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA11Q9Y5H2 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PCDHGA11Q9Y5H2 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA11Q9Y5H2 RCN1P2-201ENST00000398357 915 ntBASIC16.75■□□□□ 0.27
PCDHGA11Q9Y5H2 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.75■□□□□ 0.27
PCDHGA11Q9Y5H2 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PCDHGA11Q9Y5H2 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDHGA11Q9Y5H2 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDHGA11Q9Y5H2 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.75■□□□□ 0.27
PCDHGA11Q9Y5H2 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.75■□□□□ 0.27
PCDHGA11Q9Y5H2 PCDHB19P-201ENST00000570871 2371 ntBASIC16.75■□□□□ 0.27
PCDHGA11Q9Y5H2 AC009336.1-201ENST00000608941 1553 ntBASIC16.75■□□□□ 0.27
PCDHGA11Q9Y5H2 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
PCDHGA11Q9Y5H2 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PCDHGA11Q9Y5H2 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDHGA11Q9Y5H2 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.75■□□□□ 0.27
PCDHGA11Q9Y5H2 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA11Q9Y5H2 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PCDHGA11Q9Y5H2 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA11Q9Y5H2 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA11Q9Y5H2 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA11Q9Y5H2 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
PCDHGA11Q9Y5H2 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
PCDHGA11Q9Y5H2 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA11Q9Y5H2 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PCDHGA11Q9Y5H2 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA11Q9Y5H2 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA11Q9Y5H2 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDHGA11Q9Y5H2 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA11Q9Y5H2 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA11Q9Y5H2 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA11Q9Y5H2 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PCDHGA11Q9Y5H2 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA11Q9Y5H2 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA11Q9Y5H2 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA11Q9Y5H2 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDHGA11Q9Y5H2 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA11Q9Y5H2 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA11Q9Y5H2 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDHGA11Q9Y5H2 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDHGA11Q9Y5H2 KLF4P1-201ENST00000412782 1185 ntBASIC16.74■□□□□ 0.27
PCDHGA11Q9Y5H2 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDHGA11Q9Y5H2 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA11Q9Y5H2 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDHGA11Q9Y5H2 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.74■□□□□ 0.27
PCDHGA11Q9Y5H2 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDHGA11Q9Y5H2 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA11Q9Y5H2 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PCDHGA11Q9Y5H2 AC092119.3-201ENST00000612618 583 ntBASIC16.74■□□□□ 0.27
PCDHGA11Q9Y5H2 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PCDHGA11Q9Y5H2 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDHGA11Q9Y5H2 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA11Q9Y5H2 AC132938.5-201ENST00000624980 1813 ntBASIC16.74■□□□□ 0.27
PCDHGA11Q9Y5H2 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA11Q9Y5H2 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDHGA11Q9Y5H2 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA11Q9Y5H2 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA11Q9Y5H2 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDHGA11Q9Y5H2 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDHGA11Q9Y5H2 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.74■□□□□ 0.27
PCDHGA11Q9Y5H2 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA11Q9Y5H2 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDHGA11Q9Y5H2 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms