Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SIX4Q9UIU6 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIX4Q9UIU6 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIX4Q9UIU6 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SIX4Q9UIU6 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIX4Q9UIU6 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIX4Q9UIU6 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SIX4Q9UIU6 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SIX4Q9UIU6 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIX4Q9UIU6 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.36■□□□□ 0.53
SIX4Q9UIU6 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIX4Q9UIU6 MED15P5-201ENST00000423150 992 ntBASIC18.36■□□□□ 0.53
SIX4Q9UIU6 PMS2P1-201ENST00000431037 1228 ntBASIC18.36■□□□□ 0.53
SIX4Q9UIU6 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.36■□□□□ 0.53
SIX4Q9UIU6 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.36■□□□□ 0.53
SIX4Q9UIU6 POLD2P1-201ENST00000511220 997 ntBASIC18.36■□□□□ 0.53
SIX4Q9UIU6 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SIX4Q9UIU6 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.36■□□□□ 0.53
SIX4Q9UIU6 KRT18P58-201ENST00000527480 1120 ntBASIC18.36■□□□□ 0.53
SIX4Q9UIU6 AC107918.2-201ENST00000530817 355 ntBASIC18.36■□□□□ 0.53
SIX4Q9UIU6 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.36■□□□□ 0.53
SIX4Q9UIU6 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SIX4Q9UIU6 AC064836.3-201ENST00000607928 673 ntBASIC18.36■□□□□ 0.53
SIX4Q9UIU6 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.36■□□□□ 0.53
SIX4Q9UIU6 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIX4Q9UIU6 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIX4Q9UIU6 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIX4Q9UIU6 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIX4Q9UIU6 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIX4Q9UIU6 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIX4Q9UIU6 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SIX4Q9UIU6 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SIX4Q9UIU6 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIX4Q9UIU6 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SIX4Q9UIU6 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SIX4Q9UIU6 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.35■□□□□ 0.53
SIX4Q9UIU6 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIX4Q9UIU6 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SIX4Q9UIU6 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIX4Q9UIU6 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SIX4Q9UIU6 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.35■□□□□ 0.53
SIX4Q9UIU6 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.35■□□□□ 0.53
SIX4Q9UIU6 CRYGEP-201ENST00000412192 528 ntBASIC18.35■□□□□ 0.53
SIX4Q9UIU6 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.35■□□□□ 0.53
SIX4Q9UIU6 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.35■□□□□ 0.53
SIX4Q9UIU6 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.35■□□□□ 0.53
SIX4Q9UIU6 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.35■□□□□ 0.53
SIX4Q9UIU6 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.35■□□□□ 0.53
SIX4Q9UIU6 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.35■□□□□ 0.53
SIX4Q9UIU6 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.35■□□□□ 0.53
SIX4Q9UIU6 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.35■□□□□ 0.53
SIX4Q9UIU6 FAM197Y3-203ENST00000618346 717 ntBASIC18.35■□□□□ 0.53
SIX4Q9UIU6 REXO1L3P-201ENST00000622202 1288 ntBASIC18.35■□□□□ 0.53
SIX4Q9UIU6 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SIX4Q9UIU6 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIX4Q9UIU6 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.35■□□□□ 0.53
SIX4Q9UIU6 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SIX4Q9UIU6 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIX4Q9UIU6 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SIX4Q9UIU6 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIX4Q9UIU6 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SIX4Q9UIU6 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIX4Q9UIU6 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.35■□□□□ 0.53
SIX4Q9UIU6 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.35■□□□□ 0.53
SIX4Q9UIU6 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SIX4Q9UIU6 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SIX4Q9UIU6 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SIX4Q9UIU6 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SIX4Q9UIU6 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SIX4Q9UIU6 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SIX4Q9UIU6 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SIX4Q9UIU6 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIX4Q9UIU6 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.34■□□□□ 0.53
SIX4Q9UIU6 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.34■□□□□ 0.53
SIX4Q9UIU6 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.34■□□□□ 0.53
SIX4Q9UIU6 MIR940-201ENST00000401276 94 ntBASIC18.34■□□□□ 0.53
SIX4Q9UIU6 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SIX4Q9UIU6 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.34■□□□□ 0.53
SIX4Q9UIU6 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.34■□□□□ 0.53
SIX4Q9UIU6 PGAM5P1-201ENST00000518923 814 ntBASIC18.34■□□□□ 0.53
SIX4Q9UIU6 AC124947.2-201ENST00000547118 1133 ntBASIC18.34■□□□□ 0.53
SIX4Q9UIU6 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SIX4Q9UIU6 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.34■□□□□ 0.53
SIX4Q9UIU6 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIX4Q9UIU6 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SIX4Q9UIU6 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.34■□□□□ 0.53
SIX4Q9UIU6 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.34■□□□□ 0.53
SIX4Q9UIU6 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIX4Q9UIU6 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
SIX4Q9UIU6 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.34■□□□□ 0.53
SIX4Q9UIU6 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.34■□□□□ 0.53
SIX4Q9UIU6 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIX4Q9UIU6 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.34■□□□□ 0.53
SIX4Q9UIU6 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIX4Q9UIU6 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.33■□□□□ 0.53
SIX4Q9UIU6 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.33■□□□□ 0.53
SIX4Q9UIU6 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SIX4Q9UIU6 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.33■□□□□ 0.53
SIX4Q9UIU6 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SIX4Q9UIU6 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms