Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
DUX4Q9UBX2 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.23■□□□□ 0.03
DUX4Q9UBX2 DOC2GP-204ENST00000639052 2548 ntBASIC15.23■□□□□ 0.03
DUX4Q9UBX2 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUX4Q9UBX2 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUX4Q9UBX2 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUX4Q9UBX2 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
DUX4Q9UBX2 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
DUX4Q9UBX2 GMCL1P1-201ENST00000463439 1581 ntBASIC15.23■□□□□ 0.03
DUX4Q9UBX2 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUX4Q9UBX2 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.23■□□□□ 0.03
DUX4Q9UBX2 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUX4Q9UBX2 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
DUX4Q9UBX2 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.23■□□□□ 0.03
DUX4Q9UBX2 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.23■□□□□ 0.03
DUX4Q9UBX2 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.23■□□□□ 0.03
DUX4Q9UBX2 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.23■□□□□ 0.03
DUX4Q9UBX2 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.23■□□□□ 0.03
DUX4Q9UBX2 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUX4Q9UBX2 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
DUX4Q9UBX2 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DUX4Q9UBX2 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
DUX4Q9UBX2 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.22■□□□□ 0.03
DUX4Q9UBX2 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
DUX4Q9UBX2 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
DUX4Q9UBX2 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.22■□□□□ 0.03
DUX4Q9UBX2 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
DUX4Q9UBX2 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.22■□□□□ 0.03
DUX4Q9UBX2 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DUX4Q9UBX2 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DUX4Q9UBX2 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
DUX4Q9UBX2 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
DUX4Q9UBX2 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
DUX4Q9UBX2 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DUX4Q9UBX2 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.22■□□□□ 0.03
DUX4Q9UBX2 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.22■□□□□ 0.03
DUX4Q9UBX2 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.22■□□□□ 0.03
DUX4Q9UBX2 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.22■□□□□ 0.03
DUX4Q9UBX2 ZNF444P1-201ENST00000559497 298 ntBASIC15.22■□□□□ 0.03
DUX4Q9UBX2 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.22■□□□□ 0.03
DUX4Q9UBX2 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
DUX4Q9UBX2 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DUX4Q9UBX2 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
DUX4Q9UBX2 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
DUX4Q9UBX2 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
DUX4Q9UBX2 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DUX4Q9UBX2 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DUX4Q9UBX2 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DUX4Q9UBX2 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
DUX4Q9UBX2 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
DUX4Q9UBX2 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DUX4Q9UBX2 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.22■□□□□ 0.03
DUX4Q9UBX2 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
DUX4Q9UBX2 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
DUX4Q9UBX2 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
DUX4Q9UBX2 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
DUX4Q9UBX2 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
DUX4Q9UBX2 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.21■□□□□ 0.03
DUX4Q9UBX2 PHGDH-209ENST00000641074 1780 ntBASIC15.21■□□□□ 0.03
DUX4Q9UBX2 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
DUX4Q9UBX2 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
DUX4Q9UBX2 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
DUX4Q9UBX2 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
DUX4Q9UBX2 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
DUX4Q9UBX2 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
DUX4Q9UBX2 AC093677.2-201ENST00000600169 1863 ntBASIC15.21■□□□□ 0.03
DUX4Q9UBX2 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
DUX4Q9UBX2 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
DUX4Q9UBX2 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
DUX4Q9UBX2 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
DUX4Q9UBX2 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
DUX4Q9UBX2 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
DUX4Q9UBX2 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
DUX4Q9UBX2 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
DUX4Q9UBX2 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
DUX4Q9UBX2 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.21■□□□□ 0.03
DUX4Q9UBX2 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.21■□□□□ 0.03
DUX4Q9UBX2 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
DUX4Q9UBX2 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
DUX4Q9UBX2 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.21■□□□□ 0.03
DUX4Q9UBX2 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.21■□□□□ 0.03
DUX4Q9UBX2 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
DUX4Q9UBX2 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.21■□□□□ 0.03
DUX4Q9UBX2 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.21■□□□□ 0.03
DUX4Q9UBX2 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.21■□□□□ 0.03
DUX4Q9UBX2 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
DUX4Q9UBX2 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
DUX4Q9UBX2 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
DUX4Q9UBX2 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
DUX4Q9UBX2 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
DUX4Q9UBX2 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
DUX4Q9UBX2 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
DUX4Q9UBX2 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
DUX4Q9UBX2 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
DUX4Q9UBX2 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
DUX4Q9UBX2 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
DUX4Q9UBX2 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
DUX4Q9UBX2 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
DUX4Q9UBX2 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
DUX4Q9UBX2 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms