Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HDAC6Q9UBN7 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.49■□□□□ 0.71
HDAC6Q9UBN7 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.49■□□□□ 0.71
HDAC6Q9UBN7 CRYGEP-201ENST00000412192 528 ntBASIC19.49■□□□□ 0.71
HDAC6Q9UBN7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.49■□□□□ 0.71
HDAC6Q9UBN7 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.49■□□□□ 0.71
HDAC6Q9UBN7 SIGLEC30P-201ENST00000455569 941 ntBASIC19.49■□□□□ 0.71
HDAC6Q9UBN7 AC108073.2-201ENST00000464002 357 ntBASIC19.49■□□□□ 0.71
HDAC6Q9UBN7 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.49■□□□□ 0.71
HDAC6Q9UBN7 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HDAC6Q9UBN7 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.49■□□□□ 0.71
HDAC6Q9UBN7 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.49■□□□□ 0.71
HDAC6Q9UBN7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HDAC6Q9UBN7 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HDAC6Q9UBN7 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HDAC6Q9UBN7 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HDAC6Q9UBN7 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.49■□□□□ 0.71
HDAC6Q9UBN7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.49■□□□□ 0.71
HDAC6Q9UBN7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.49■□□□□ 0.71
HDAC6Q9UBN7 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HDAC6Q9UBN7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HDAC6Q9UBN7 AC022211.2-201ENST00000585075 2527 ntBASIC19.49■□□□□ 0.71
HDAC6Q9UBN7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
HDAC6Q9UBN7 AC006116.8-202ENST00000587620 1550 ntBASIC19.49■□□□□ 0.71
HDAC6Q9UBN7 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HDAC6Q9UBN7 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
HDAC6Q9UBN7 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HDAC6Q9UBN7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.48■□□□□ 0.71
HDAC6Q9UBN7 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HDAC6Q9UBN7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HDAC6Q9UBN7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
HDAC6Q9UBN7 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.48■□□□□ 0.71
HDAC6Q9UBN7 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HDAC6Q9UBN7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HDAC6Q9UBN7 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HDAC6Q9UBN7 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HDAC6Q9UBN7 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HDAC6Q9UBN7 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HDAC6Q9UBN7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
HDAC6Q9UBN7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.48■□□□□ 0.71
HDAC6Q9UBN7 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.48■□□□□ 0.71
HDAC6Q9UBN7 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HDAC6Q9UBN7 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HDAC6Q9UBN7 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HDAC6Q9UBN7 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.48■□□□□ 0.71
HDAC6Q9UBN7 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.48■□□□□ 0.71
HDAC6Q9UBN7 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.48■□□□□ 0.71
HDAC6Q9UBN7 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.48■□□□□ 0.71
HDAC6Q9UBN7 AC079781.4-201ENST00000641908 219 ntBASIC19.48■□□□□ 0.71
HDAC6Q9UBN7 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HDAC6Q9UBN7 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
HDAC6Q9UBN7 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
HDAC6Q9UBN7 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HDAC6Q9UBN7 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HDAC6Q9UBN7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
HDAC6Q9UBN7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HDAC6Q9UBN7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
HDAC6Q9UBN7 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.48■□□□□ 0.71
HDAC6Q9UBN7 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HDAC6Q9UBN7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HDAC6Q9UBN7 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
HDAC6Q9UBN7 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.48■□□□□ 0.71
HDAC6Q9UBN7 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HDAC6Q9UBN7 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HDAC6Q9UBN7 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HDAC6Q9UBN7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HDAC6Q9UBN7 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HDAC6Q9UBN7 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
HDAC6Q9UBN7 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
HDAC6Q9UBN7 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.47■□□□□ 0.71
HDAC6Q9UBN7 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HDAC6Q9UBN7 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HDAC6Q9UBN7 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
HDAC6Q9UBN7 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HDAC6Q9UBN7 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.47■□□□□ 0.71
HDAC6Q9UBN7 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.47■□□□□ 0.71
HDAC6Q9UBN7 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.47■□□□□ 0.71
HDAC6Q9UBN7 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HDAC6Q9UBN7 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HDAC6Q9UBN7 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
HDAC6Q9UBN7 AC009949.1-201ENST00000623048 1830 ntBASIC19.47■□□□□ 0.71
HDAC6Q9UBN7 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.47■□□□□ 0.71
HDAC6Q9UBN7 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.47■□□□□ 0.71
HDAC6Q9UBN7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.47■□□□□ 0.71
HDAC6Q9UBN7 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.47■□□□□ 0.71
HDAC6Q9UBN7 RPS15P9-201ENST00000494093 319 ntBASIC19.47■□□□□ 0.71
HDAC6Q9UBN7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.47■□□□□ 0.71
HDAC6Q9UBN7 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.47■□□□□ 0.71
HDAC6Q9UBN7 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.47■□□□□ 0.71
HDAC6Q9UBN7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.47■□□□□ 0.71
HDAC6Q9UBN7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
HDAC6Q9UBN7 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
HDAC6Q9UBN7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HDAC6Q9UBN7 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HDAC6Q9UBN7 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
HDAC6Q9UBN7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HDAC6Q9UBN7 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
HDAC6Q9UBN7 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.47■□□□□ 0.71
HDAC6Q9UBN7 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
HDAC6Q9UBN7 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms