Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 NFIC-211ENST00000641145 8399 ntBASIC15.83■□□□□ 0.13
LRFN1Q9P244 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
LRFN1Q9P244 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.83■□□□□ 0.13
LRFN1Q9P244 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
LRFN1Q9P244 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LRFN1Q9P244 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LRFN1Q9P244 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
LRFN1Q9P244 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.83■□□□□ 0.12
LRFN1Q9P244 AL390961.4-201ENST00000623958 2535 ntBASIC15.83■□□□□ 0.12
LRFN1Q9P244 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRFN1Q9P244 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRFN1Q9P244 RPSAP43-201ENST00000402237 625 ntBASIC15.83■□□□□ 0.12
LRFN1Q9P244 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.83■□□□□ 0.12
LRFN1Q9P244 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.83■□□□□ 0.12
LRFN1Q9P244 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.83■□□□□ 0.12
LRFN1Q9P244 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.83■□□□□ 0.12
LRFN1Q9P244 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.83■□□□□ 0.12
LRFN1Q9P244 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.83■□□□□ 0.12
LRFN1Q9P244 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.83■□□□□ 0.12
LRFN1Q9P244 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.83■□□□□ 0.12
LRFN1Q9P244 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.83■□□□□ 0.12
LRFN1Q9P244 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
LRFN1Q9P244 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.83■□□□□ 0.12
LRFN1Q9P244 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.83■□□□□ 0.12
LRFN1Q9P244 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.83■□□□□ 0.12
LRFN1Q9P244 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRFN1Q9P244 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRFN1Q9P244 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
LRFN1Q9P244 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRFN1Q9P244 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.83■□□□□ 0.12
LRFN1Q9P244 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRFN1Q9P244 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.82■□□□□ 0.12
LRFN1Q9P244 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC15.82■□□□□ 0.12
LRFN1Q9P244 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
LRFN1Q9P244 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRFN1Q9P244 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
LRFN1Q9P244 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
LRFN1Q9P244 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
LRFN1Q9P244 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.82■□□□□ 0.12
LRFN1Q9P244 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC15.82■□□□□ 0.12
LRFN1Q9P244 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
LRFN1Q9P244 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRFN1Q9P244 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.82■□□□□ 0.12
LRFN1Q9P244 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
LRFN1Q9P244 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.82■□□□□ 0.12
LRFN1Q9P244 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.82■□□□□ 0.12
LRFN1Q9P244 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRFN1Q9P244 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.82■□□□□ 0.12
LRFN1Q9P244 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.82■□□□□ 0.12
LRFN1Q9P244 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.82■□□□□ 0.12
LRFN1Q9P244 AC018845.2-201ENST00000568326 409 ntBASIC15.82■□□□□ 0.12
LRFN1Q9P244 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.82■□□□□ 0.12
LRFN1Q9P244 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.82■□□□□ 0.12
LRFN1Q9P244 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.82■□□□□ 0.12
LRFN1Q9P244 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
LRFN1Q9P244 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRFN1Q9P244 AC002310.6-201ENST00000624451 1377 ntBASIC15.82■□□□□ 0.12
LRFN1Q9P244 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
LRFN1Q9P244 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRFN1Q9P244 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRFN1Q9P244 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
LRFN1Q9P244 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRFN1Q9P244 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRFN1Q9P244 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRFN1Q9P244 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.82■□□□□ 0.12
LRFN1Q9P244 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRFN1Q9P244 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRFN1Q9P244 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.82■□□□□ 0.12
LRFN1Q9P244 AL355312.1-201ENST00000407115 2176 ntBASIC15.82■□□□□ 0.12
LRFN1Q9P244 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRFN1Q9P244 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRFN1Q9P244 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRFN1Q9P244 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRFN1Q9P244 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRFN1Q9P244 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRFN1Q9P244 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRFN1Q9P244 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
LRFN1Q9P244 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRFN1Q9P244 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRFN1Q9P244 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
LRFN1Q9P244 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRFN1Q9P244 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.81■□□□□ 0.12
LRFN1Q9P244 LYSMD4-203ENST00000378904 2122 ntBASIC15.81■□□□□ 0.12
LRFN1Q9P244 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRFN1Q9P244 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
LRFN1Q9P244 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRFN1Q9P244 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRFN1Q9P244 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC15.81■□□□□ 0.12
LRFN1Q9P244 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.81■□□□□ 0.12
LRFN1Q9P244 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRFN1Q9P244 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRFN1Q9P244 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.81■□□□□ 0.12
LRFN1Q9P244 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRFN1Q9P244 AC112482.1-201ENST00000492080 688 ntBASIC15.81■□□□□ 0.12
LRFN1Q9P244 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRFN1Q9P244 AC020916.1-201ENST00000587762 1774 ntBASIC15.81■□□□□ 0.12
LRFN1Q9P244 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRFN1Q9P244 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.81■□□□□ 0.12
LRFN1Q9P244 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
LRFN1Q9P244 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms