Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CUEDC1Q9NWM3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.7■□□□□ 0.26
CUEDC1Q9NWM3 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CUEDC1Q9NWM3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CUEDC1Q9NWM3 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CUEDC1Q9NWM3 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CUEDC1Q9NWM3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CUEDC1Q9NWM3 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CUEDC1Q9NWM3 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CUEDC1Q9NWM3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CUEDC1Q9NWM3 PRORSD1P-202ENST00000563365 2154 ntBASIC16.7■□□□□ 0.26
CUEDC1Q9NWM3 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CUEDC1Q9NWM3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CUEDC1Q9NWM3 AC097637.2-201ENST00000624096 1997 ntBASIC16.69■□□□□ 0.26
CUEDC1Q9NWM3 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CUEDC1Q9NWM3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CUEDC1Q9NWM3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CUEDC1Q9NWM3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.69■□□□□ 0.26
CUEDC1Q9NWM3 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CUEDC1Q9NWM3 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CUEDC1Q9NWM3 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.69■□□□□ 0.26
CUEDC1Q9NWM3 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
CUEDC1Q9NWM3 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CUEDC1Q9NWM3 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CUEDC1Q9NWM3 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CUEDC1Q9NWM3 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CUEDC1Q9NWM3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CUEDC1Q9NWM3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CUEDC1Q9NWM3 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.69■□□□□ 0.26
CUEDC1Q9NWM3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.69■□□□□ 0.26
CUEDC1Q9NWM3 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.69■□□□□ 0.26
CUEDC1Q9NWM3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.69■□□□□ 0.26
CUEDC1Q9NWM3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
CUEDC1Q9NWM3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.69■□□□□ 0.26
CUEDC1Q9NWM3 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.69■□□□□ 0.26
CUEDC1Q9NWM3 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.69■□□□□ 0.26
CUEDC1Q9NWM3 MTDHP4-201ENST00000600287 670 ntBASIC16.69■□□□□ 0.26
CUEDC1Q9NWM3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CUEDC1Q9NWM3 AC025062.2-201ENST00000605477 670 ntBASIC16.69■□□□□ 0.26
CUEDC1Q9NWM3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.69■□□□□ 0.26
CUEDC1Q9NWM3 AL773604.1-201ENST00000617417 272 ntBASIC16.69■□□□□ 0.26
CUEDC1Q9NWM3 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.69■□□□□ 0.26
CUEDC1Q9NWM3 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CUEDC1Q9NWM3 AC012313.1-201ENST00000593393 3059 ntBASIC16.69■□□□□ 0.26
CUEDC1Q9NWM3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CUEDC1Q9NWM3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CUEDC1Q9NWM3 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.69■□□□□ 0.26
CUEDC1Q9NWM3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.69■□□□□ 0.26
CUEDC1Q9NWM3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
CUEDC1Q9NWM3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CUEDC1Q9NWM3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CUEDC1Q9NWM3 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CUEDC1Q9NWM3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CUEDC1Q9NWM3 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CUEDC1Q9NWM3 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CUEDC1Q9NWM3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CUEDC1Q9NWM3 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CUEDC1Q9NWM3 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CUEDC1Q9NWM3 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CUEDC1Q9NWM3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CUEDC1Q9NWM3 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.68■□□□□ 0.26
CUEDC1Q9NWM3 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CUEDC1Q9NWM3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CUEDC1Q9NWM3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CUEDC1Q9NWM3 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CUEDC1Q9NWM3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CUEDC1Q9NWM3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CUEDC1Q9NWM3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CUEDC1Q9NWM3 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.68■□□□□ 0.26
CUEDC1Q9NWM3 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.68■□□□□ 0.26
CUEDC1Q9NWM3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.68■□□□□ 0.26
CUEDC1Q9NWM3 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.68■□□□□ 0.26
CUEDC1Q9NWM3 FAM197Y8-203ENST00000450145 560 ntBASIC16.68■□□□□ 0.26
CUEDC1Q9NWM3 RNPS1P1-201ENST00000507437 918 ntBASIC16.68■□□□□ 0.26
CUEDC1Q9NWM3 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CUEDC1Q9NWM3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.68■□□□□ 0.26
CUEDC1Q9NWM3 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.68■□□□□ 0.26
CUEDC1Q9NWM3 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CUEDC1Q9NWM3 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.68■□□□□ 0.26
CUEDC1Q9NWM3 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CUEDC1Q9NWM3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CUEDC1Q9NWM3 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CUEDC1Q9NWM3 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CUEDC1Q9NWM3 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.68■□□□□ 0.26
CUEDC1Q9NWM3 AC116353.5-201ENST00000638148 1699 ntBASIC16.68■□□□□ 0.26
CUEDC1Q9NWM3 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CUEDC1Q9NWM3 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CUEDC1Q9NWM3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.68■□□□□ 0.26
CUEDC1Q9NWM3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CUEDC1Q9NWM3 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CUEDC1Q9NWM3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.68■□□□□ 0.26
CUEDC1Q9NWM3 PMS2P7-201ENST00000506558 1336 ntBASIC16.68■□□□□ 0.26
CUEDC1Q9NWM3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CUEDC1Q9NWM3 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CUEDC1Q9NWM3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CUEDC1Q9NWM3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CUEDC1Q9NWM3 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CUEDC1Q9NWM3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.67■□□□□ 0.26
CUEDC1Q9NWM3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.67■□□□□ 0.26
CUEDC1Q9NWM3 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms