Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Gm14701-201ENSMUST00000117156 348 ntBASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Gm29310-201ENSMUST00000185468 696 ntBASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Gm21825-201ENSMUST00000185728 696 ntBASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Gm29109-201ENSMUST00000185895 696 ntBASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Gm21896-201ENSMUST00000186520 696 ntBASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Gm21873-201ENSMUST00000186728 696 ntBASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Gm21794-201ENSMUST00000187056 696 ntBASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Gm21880-201ENSMUST00000187275 696 ntBASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Gm21826-201ENSMUST00000187451 696 ntBASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Gm21198-201ENSMUST00000188393 696 ntBASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Gm21749-201ENSMUST00000189343 696 ntBASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Gm21901-201ENSMUST00000189568 696 ntBASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Gm29424-201ENSMUST00000189716 696 ntBASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Gm28599-201ENSMUST00000189838 694 ntBASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Gm21867-201ENSMUST00000189917 696 ntBASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Gm29269-201ENSMUST00000190087 696 ntBASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Gm21722-201ENSMUST00000190153 696 ntBASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Gm28423-201ENSMUST00000190701 696 ntBASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Gm21899-201ENSMUST00000190745 696 ntBASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Gm21910-201ENSMUST00000191163 696 ntBASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Gm21849-201ENSMUST00000191571 696 ntBASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Gm28678-201ENSMUST00000191593 696 ntBASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Gm20910-201ENSMUST00000193268 696 ntBASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Gm21871-201ENSMUST00000194621 696 ntBASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Gm7774-201ENSMUST00000200064 533 ntBASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa3Q9CQ71 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa3Q9CQ71 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa3Q9CQ71 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa3Q9CQ71 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Rpa3Q9CQ71 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa3Q9CQ71 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa3Q9CQ71 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa3Q9CQ71 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa3Q9CQ71 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa3Q9CQ71 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa3Q9CQ71 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa3Q9CQ71 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.1■□□□□ 0.01
Rpa3Q9CQ71 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa3Q9CQ71 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa3Q9CQ71 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC15.1■□□□□ 0.01
Rpa3Q9CQ71 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa3Q9CQ71 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa3Q9CQ71 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Rpa3Q9CQ71 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rpa3Q9CQ71 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.1■□□□□ 0.01
Rpa3Q9CQ71 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa3Q9CQ71 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa3Q9CQ71 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa3Q9CQ71 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa3Q9CQ71 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa3Q9CQ71 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa3Q9CQ71 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Rpa3Q9CQ71 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa3Q9CQ71 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa3Q9CQ71 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.1■□□□□ 0.01
Rpa3Q9CQ71 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa3Q9CQ71 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa3Q9CQ71 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa3Q9CQ71 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC15.1■□□□□ 0.01
Rpa3Q9CQ71 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rpa3Q9CQ71 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpa3Q9CQ71 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpa3Q9CQ71 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Rpa3Q9CQ71 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpa3Q9CQ71 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpa3Q9CQ71 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpa3Q9CQ71 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpa3Q9CQ71 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpa3Q9CQ71 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms