Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 AC104109.2-201ENST00000602919 1418 ntBASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 AL139424.1-201ENST00000607572 797 ntBASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 AL139327.4-201ENST00000612362 153 ntBASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 AC117500.6-201ENST00000624871 588 ntBASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 LINC00304-203ENST00000565008 1864 ntBASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SSBP3Q9BWW4 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP3Q9BWW4 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP3Q9BWW4 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP3Q9BWW4 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP3Q9BWW4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP3Q9BWW4 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP3Q9BWW4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.4□□□□□ -0.1
SSBP3Q9BWW4 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC14.4□□□□□ -0.1
SSBP3Q9BWW4 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC14.4□□□□□ -0.1
SSBP3Q9BWW4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP3Q9BWW4 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.4□□□□□ -0.1
SSBP3Q9BWW4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.4□□□□□ -0.1
SSBP3Q9BWW4 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.4□□□□□ -0.1
SSBP3Q9BWW4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP3Q9BWW4 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.4□□□□□ -0.1
SSBP3Q9BWW4 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.4□□□□□ -0.1
SSBP3Q9BWW4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SSBP3Q9BWW4 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.4□□□□□ -0.1
SSBP3Q9BWW4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SSBP3Q9BWW4 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.4□□□□□ -0.1
SSBP3Q9BWW4 RNA5SP415-201ENST00000517246 115 ntBASIC14.4□□□□□ -0.1
SSBP3Q9BWW4 KRT18P58-201ENST00000527480 1120 ntBASIC14.4□□□□□ -0.1
SSBP3Q9BWW4 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP3Q9BWW4 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.4□□□□□ -0.1
SSBP3Q9BWW4 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.4□□□□□ -0.1
SSBP3Q9BWW4 AC145285.3-201ENST00000564603 959 ntBASIC14.4□□□□□ -0.1
SSBP3Q9BWW4 Z83851.2-201ENST00000609564 659 ntBASIC14.4□□□□□ -0.1
SSBP3Q9BWW4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.4□□□□□ -0.1
SSBP3Q9BWW4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.4□□□□□ -0.1
SSBP3Q9BWW4 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SSBP3Q9BWW4 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP3Q9BWW4 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP3Q9BWW4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
SSBP3Q9BWW4 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC14.4□□□□□ -0.1
SSBP3Q9BWW4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP3Q9BWW4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP3Q9BWW4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP3Q9BWW4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP3Q9BWW4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP3Q9BWW4 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms