Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SLF1Q9BQI6 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLF1Q9BQI6 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLF1Q9BQI6 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.03■□□□□ 0.8
SLF1Q9BQI6 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLF1Q9BQI6 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SLF1Q9BQI6 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLF1Q9BQI6 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC20.03■□□□□ 0.8
SLF1Q9BQI6 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.03■□□□□ 0.8
SLF1Q9BQI6 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLF1Q9BQI6 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.03■□□□□ 0.8
SLF1Q9BQI6 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC20.03■□□□□ 0.8
SLF1Q9BQI6 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
SLF1Q9BQI6 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC20.03■□□□□ 0.8
SLF1Q9BQI6 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SLF1Q9BQI6 AC010507.1-201ENST00000633895 436 ntBASIC20.03■□□□□ 0.8
SLF1Q9BQI6 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SLF1Q9BQI6 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLF1Q9BQI6 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLF1Q9BQI6 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLF1Q9BQI6 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.03■□□□□ 0.8
SLF1Q9BQI6 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLF1Q9BQI6 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.03■□□□□ 0.8
SLF1Q9BQI6 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLF1Q9BQI6 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLF1Q9BQI6 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC20.02■□□□□ 0.8
SLF1Q9BQI6 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLF1Q9BQI6 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLF1Q9BQI6 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLF1Q9BQI6 AC096734.2-201ENST00000562054 433 ntBASIC20.02■□□□□ 0.8
SLF1Q9BQI6 AC005829.1-201ENST00000570002 483 ntBASIC20.02■□□□□ 0.8
SLF1Q9BQI6 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC20.02■□□□□ 0.8
SLF1Q9BQI6 AC079781.4-201ENST00000641908 219 ntBASIC20.02■□□□□ 0.8
SLF1Q9BQI6 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLF1Q9BQI6 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLF1Q9BQI6 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SLF1Q9BQI6 AC139713.2-201ENST00000641328 2723 ntBASIC20.02■□□□□ 0.79
SLF1Q9BQI6 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SLF1Q9BQI6 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.02■□□□□ 0.79
SLF1Q9BQI6 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SLF1Q9BQI6 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SLF1Q9BQI6 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.02■□□□□ 0.79
SLF1Q9BQI6 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
SLF1Q9BQI6 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLF1Q9BQI6 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.01■□□□□ 0.79
SLF1Q9BQI6 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SLF1Q9BQI6 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SLF1Q9BQI6 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC20.01■□□□□ 0.79
SLF1Q9BQI6 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLF1Q9BQI6 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SLF1Q9BQI6 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SLF1Q9BQI6 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.01■□□□□ 0.79
SLF1Q9BQI6 AC211486.1-202ENST00000416371 468 ntBASIC20.01■□□□□ 0.79
SLF1Q9BQI6 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.01■□□□□ 0.79
SLF1Q9BQI6 ALG1L5P-201ENST00000482043 771 ntBASIC20.01■□□□□ 0.79
SLF1Q9BQI6 AC211476.1-201ENST00000503899 468 ntBASIC20.01■□□□□ 0.79
SLF1Q9BQI6 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC20.01■□□□□ 0.79
SLF1Q9BQI6 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.01■□□□□ 0.79
SLF1Q9BQI6 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SLF1Q9BQI6 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SLF1Q9BQI6 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLF1Q9BQI6 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLF1Q9BQI6 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.01■□□□□ 0.79
SLF1Q9BQI6 BCL2-203ENST00000589955 5011 ntBASIC20.01■□□□□ 0.79
SLF1Q9BQI6 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLF1Q9BQI6 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLF1Q9BQI6 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.01■□□□□ 0.79
SLF1Q9BQI6 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLF1Q9BQI6 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLF1Q9BQI6 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.01■□□□□ 0.79
SLF1Q9BQI6 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLF1Q9BQI6 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLF1Q9BQI6 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLF1Q9BQI6 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLF1Q9BQI6 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLF1Q9BQI6 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLF1Q9BQI6 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SLF1Q9BQI6 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLF1Q9BQI6 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20■□□□□ 0.79
SLF1Q9BQI6 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLF1Q9BQI6 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SLF1Q9BQI6 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SLF1Q9BQI6 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLF1Q9BQI6 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLF1Q9BQI6 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20■□□□□ 0.79
SLF1Q9BQI6 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20■□□□□ 0.79
SLF1Q9BQI6 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
SLF1Q9BQI6 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20■□□□□ 0.79
SLF1Q9BQI6 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20■□□□□ 0.79
SLF1Q9BQI6 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
SLF1Q9BQI6 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLF1Q9BQI6 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
SLF1Q9BQI6 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLF1Q9BQI6 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SLF1Q9BQI6 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20■□□□□ 0.79
SLF1Q9BQI6 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SLF1Q9BQI6 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20■□□□□ 0.79
SLF1Q9BQI6 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SLF1Q9BQI6 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.99■□□□□ 0.79
SLF1Q9BQI6 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms