Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.54■□□□□ 0.72
PTPN18Q99952 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN18Q99952 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN18Q99952 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PTPN18Q99952 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN18Q99952 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN18Q99952 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC19.54■□□□□ 0.72
PTPN18Q99952 AC142381.1-201ENST00000426099 345 ntBASIC19.54■□□□□ 0.72
PTPN18Q99952 PTPA-220ENST00000436883 532 ntTSL 4 BASIC19.54■□□□□ 0.72
PTPN18Q99952 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN18Q99952 AC009477.1-201ENST00000452936 217 ntBASIC19.54■□□□□ 0.72
PTPN18Q99952 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.54■□□□□ 0.72
PTPN18Q99952 IGHV3-71-201ENST00000523324 359 ntBASIC19.54■□□□□ 0.72
PTPN18Q99952 RARRES2P9-201ENST00000565168 469 ntBASIC19.54■□□□□ 0.72
PTPN18Q99952 IFT20-216ENST00000588477 774 ntTSL 5 BASIC19.54■□□□□ 0.72
PTPN18Q99952 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC19.54■□□□□ 0.72
PTPN18Q99952 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC19.54■□□□□ 0.72
PTPN18Q99952 MIR6799-201ENST00000620297 69 ntBASIC19.54■□□□□ 0.72
PTPN18Q99952 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN18Q99952 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN18Q99952 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
PTPN18Q99952 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.54■□□□□ 0.72
PTPN18Q99952 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN18Q99952 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN18Q99952 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN18Q99952 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN18Q99952 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN18Q99952 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN18Q99952 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN18Q99952 AP3S2-216ENST00000617003 1561 ntBASIC19.53■□□□□ 0.72
PTPN18Q99952 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
PTPN18Q99952 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN18Q99952 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN18Q99952 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.53■□□□□ 0.72
PTPN18Q99952 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN18Q99952 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN18Q99952 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN18Q99952 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC19.53■□□□□ 0.72
PTPN18Q99952 HCG4-201ENST00000418983 998 ntBASIC19.53■□□□□ 0.72
PTPN18Q99952 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN18Q99952 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC19.53■□□□□ 0.72
PTPN18Q99952 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.53■□□□□ 0.72
PTPN18Q99952 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.53■□□□□ 0.72
PTPN18Q99952 HILS1-202ENST00000545329 423 ntBASIC19.53■□□□□ 0.72
PTPN18Q99952 AC010336.2-201ENST00000564226 506 ntBASIC19.53■□□□□ 0.72
PTPN18Q99952 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.53■□□□□ 0.72
PTPN18Q99952 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN18Q99952 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PTPN18Q99952 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.53■□□□□ 0.72
PTPN18Q99952 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN18Q99952 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN18Q99952 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN18Q99952 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.52■□□□□ 0.72
PTPN18Q99952 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTPN18Q99952 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PTPN18Q99952 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.52■□□□□ 0.72
PTPN18Q99952 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.52■□□□□ 0.72
PTPN18Q99952 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PTPN18Q99952 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTPN18Q99952 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTPN18Q99952 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.52■□□□□ 0.72
PTPN18Q99952 FLJ13224-201ENST00000313737 1514 ntBASIC19.52■□□□□ 0.72
PTPN18Q99952 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.52■□□□□ 0.72
PTPN18Q99952 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PTPN18Q99952 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.52■□□□□ 0.72
PTPN18Q99952 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC19.52■□□□□ 0.72
PTPN18Q99952 API5-211ENST00000534695 560 ntTSL 5 BASIC19.52■□□□□ 0.72
PTPN18Q99952 AC008738.7-201ENST00000609744 511 ntBASIC19.52■□□□□ 0.72
PTPN18Q99952 AC003101.2-201ENST00000612557 442 ntBASIC19.52■□□□□ 0.72
PTPN18Q99952 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.52■□□□□ 0.72
PTPN18Q99952 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC19.52■□□□□ 0.72
PTPN18Q99952 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
PTPN18Q99952 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
PTPN18Q99952 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PTPN18Q99952 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
PTPN18Q99952 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.52■□□□□ 0.71
PTPN18Q99952 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC19.51■□□□□ 0.71
PTPN18Q99952 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTPN18Q99952 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.51■□□□□ 0.71
PTPN18Q99952 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PTPN18Q99952 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.51■□□□□ 0.71
PTPN18Q99952 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PTPN18Q99952 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
PTPN18Q99952 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTPN18Q99952 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPN18Q99952 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTPN18Q99952 MIR3909-201ENST00000579518 119 ntBASIC19.51■□□□□ 0.71
PTPN18Q99952 AC007967.4-201ENST00000614700 386 ntBASIC19.51■□□□□ 0.71
PTPN18Q99952 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTPN18Q99952 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.51■□□□□ 0.71
PTPN18Q99952 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPN18Q99952 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
PTPN18Q99952 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPN18Q99952 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTPN18Q99952 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.51■□□□□ 0.71
PTPN18Q99952 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPN18Q99952 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
PTPN18Q99952 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPN18Q99952 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPN18Q99952 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms