Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 FRMD8P1-201ENST00000440433 1524 ntBASIC18.02■□□□□ 0.47
SMOQ99835 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SMOQ99835 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
SMOQ99835 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SMOQ99835 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
SMOQ99835 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SMOQ99835 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.01■□□□□ 0.47
SMOQ99835 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.01■□□□□ 0.47
SMOQ99835 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SMOQ99835 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.01■□□□□ 0.47
SMOQ99835 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SMOQ99835 BCL2-203ENST00000589955 5011 ntBASIC18.01■□□□□ 0.47
SMOQ99835 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SMOQ99835 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SMOQ99835 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
SMOQ99835 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SMOQ99835 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SMOQ99835 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SMOQ99835 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SMOQ99835 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SMOQ99835 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.01■□□□□ 0.47
SMOQ99835 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
SMOQ99835 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.01■□□□□ 0.47
SMOQ99835 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.01■□□□□ 0.47
SMOQ99835 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
SMOQ99835 AC018845.2-201ENST00000568326 409 ntBASIC18.01■□□□□ 0.47
SMOQ99835 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.01■□□□□ 0.47
SMOQ99835 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SMOQ99835 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.01■□□□□ 0.47
SMOQ99835 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
SMOQ99835 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SMOQ99835 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SMOQ99835 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
SMOQ99835 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SMOQ99835 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.01■□□□□ 0.47
SMOQ99835 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.01■□□□□ 0.47
SMOQ99835 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SMOQ99835 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SMOQ99835 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SMOQ99835 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SMOQ99835 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SMOQ99835 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SMOQ99835 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SMOQ99835 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SMOQ99835 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18■□□□□ 0.47
SMOQ99835 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SMOQ99835 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18■□□□□ 0.47
SMOQ99835 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SMOQ99835 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SMOQ99835 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SMOQ99835 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
SMOQ99835 AC092053.1-201ENST00000605787 1936 ntBASIC18■□□□□ 0.47
SMOQ99835 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SMOQ99835 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SMOQ99835 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SMOQ99835 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SMOQ99835 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18■□□□□ 0.47
SMOQ99835 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SMOQ99835 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18■□□□□ 0.47
SMOQ99835 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18■□□□□ 0.47
SMOQ99835 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18■□□□□ 0.47
SMOQ99835 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18■□□□□ 0.47
SMOQ99835 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18■□□□□ 0.47
SMOQ99835 ATP6V0CP3-201ENST00000417255 467 ntBASIC18■□□□□ 0.47
SMOQ99835 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18■□□□□ 0.47
SMOQ99835 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18■□□□□ 0.47
SMOQ99835 DUX4L17-201ENST00000557360 1267 ntBASIC18■□□□□ 0.47
SMOQ99835 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18■□□□□ 0.47
SMOQ99835 AC010507.1-201ENST00000633895 436 ntBASIC18■□□□□ 0.47
SMOQ99835 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SMOQ99835 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SMOQ99835 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SMOQ99835 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
SMOQ99835 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SMOQ99835 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18■□□□□ 0.47
SMOQ99835 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18■□□□□ 0.47
SMOQ99835 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
SMOQ99835 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SMOQ99835 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SMOQ99835 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SMOQ99835 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SMOQ99835 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18■□□□□ 0.47
SMOQ99835 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18■□□□□ 0.47
SMOQ99835 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SMOQ99835 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SMOQ99835 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SMOQ99835 AC108860.2-201ENST00000562760 2183 ntBASIC18■□□□□ 0.47
SMOQ99835 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18■□□□□ 0.47
SMOQ99835 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18■□□□□ 0.47
SMOQ99835 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SMOQ99835 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMOQ99835 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.99■□□□□ 0.47
SMOQ99835 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMOQ99835 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMOQ99835 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SMOQ99835 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMOQ99835 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMOQ99835 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
SMOQ99835 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMOQ99835 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms