Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HERC6Q8IVU3 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HERC6Q8IVU3 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.6■□□□□ 0.57
HERC6Q8IVU3 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HERC6Q8IVU3 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.6■□□□□ 0.57
HERC6Q8IVU3 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
HERC6Q8IVU3 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
HERC6Q8IVU3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HERC6Q8IVU3 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
HERC6Q8IVU3 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HERC6Q8IVU3 AC009113.1-201ENST00000570267 2443 ntBASIC18.6■□□□□ 0.57
HERC6Q8IVU3 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HERC6Q8IVU3 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HERC6Q8IVU3 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HERC6Q8IVU3 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HERC6Q8IVU3 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HERC6Q8IVU3 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.6■□□□□ 0.57
HERC6Q8IVU3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.6■□□□□ 0.57
HERC6Q8IVU3 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.59■□□□□ 0.57
HERC6Q8IVU3 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HERC6Q8IVU3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HERC6Q8IVU3 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.59■□□□□ 0.57
HERC6Q8IVU3 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
HERC6Q8IVU3 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.59■□□□□ 0.57
HERC6Q8IVU3 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HERC6Q8IVU3 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.59■□□□□ 0.57
HERC6Q8IVU3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HERC6Q8IVU3 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.59■□□□□ 0.57
HERC6Q8IVU3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
HERC6Q8IVU3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.59■□□□□ 0.57
HERC6Q8IVU3 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HERC6Q8IVU3 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HERC6Q8IVU3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.59■□□□□ 0.57
HERC6Q8IVU3 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
HERC6Q8IVU3 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HERC6Q8IVU3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
HERC6Q8IVU3 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.59■□□□□ 0.57
HERC6Q8IVU3 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.59■□□□□ 0.57
HERC6Q8IVU3 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.59■□□□□ 0.57
HERC6Q8IVU3 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HERC6Q8IVU3 AC107890.1-201ENST00000422478 521 ntBASIC18.59■□□□□ 0.57
HERC6Q8IVU3 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
HERC6Q8IVU3 UGT1A2P-201ENST00000454886 866 ntBASIC18.59■□□□□ 0.57
HERC6Q8IVU3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.59■□□□□ 0.57
HERC6Q8IVU3 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.59■□□□□ 0.57
HERC6Q8IVU3 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.59■□□□□ 0.57
HERC6Q8IVU3 AC243562.1-201ENST00000560672 389 ntBASIC18.59■□□□□ 0.57
HERC6Q8IVU3 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HERC6Q8IVU3 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HERC6Q8IVU3 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.59■□□□□ 0.57
HERC6Q8IVU3 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
HERC6Q8IVU3 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.59■□□□□ 0.57
HERC6Q8IVU3 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
HERC6Q8IVU3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HERC6Q8IVU3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HERC6Q8IVU3 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
HERC6Q8IVU3 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
HERC6Q8IVU3 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.59■□□□□ 0.57
HERC6Q8IVU3 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HERC6Q8IVU3 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HERC6Q8IVU3 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HERC6Q8IVU3 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HERC6Q8IVU3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
HERC6Q8IVU3 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HERC6Q8IVU3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.58■□□□□ 0.57
HERC6Q8IVU3 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HERC6Q8IVU3 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
HERC6Q8IVU3 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HERC6Q8IVU3 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HERC6Q8IVU3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.58■□□□□ 0.57
HERC6Q8IVU3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HERC6Q8IVU3 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HERC6Q8IVU3 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HERC6Q8IVU3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HERC6Q8IVU3 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HERC6Q8IVU3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.58■□□□□ 0.56
HERC6Q8IVU3 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.58■□□□□ 0.56
HERC6Q8IVU3 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.58■□□□□ 0.56
HERC6Q8IVU3 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.58■□□□□ 0.56
HERC6Q8IVU3 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.58■□□□□ 0.56
HERC6Q8IVU3 AL645728.2-201ENST00000641974 660 ntBASIC18.58■□□□□ 0.56
HERC6Q8IVU3 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HERC6Q8IVU3 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.58■□□□□ 0.56
HERC6Q8IVU3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HERC6Q8IVU3 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HERC6Q8IVU3 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.58■□□□□ 0.56
HERC6Q8IVU3 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HERC6Q8IVU3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.56
HERC6Q8IVU3 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.58■□□□□ 0.56
HERC6Q8IVU3 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
HERC6Q8IVU3 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HERC6Q8IVU3 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HERC6Q8IVU3 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HERC6Q8IVU3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
HERC6Q8IVU3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HERC6Q8IVU3 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
HERC6Q8IVU3 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.57■□□□□ 0.56
HERC6Q8IVU3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HERC6Q8IVU3 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HERC6Q8IVU3 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms