Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
OTOP1Q7RTM1 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.88■□□□□ 0.77
OTOP1Q7RTM1 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
OTOP1Q7RTM1 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
OTOP1Q7RTM1 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.88■□□□□ 0.77
OTOP1Q7RTM1 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC19.88■□□□□ 0.77
OTOP1Q7RTM1 FAM185BP-201ENST00000443595 716 ntBASIC19.88■□□□□ 0.77
OTOP1Q7RTM1 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.88■□□□□ 0.77
OTOP1Q7RTM1 AC125807.1-201ENST00000483097 614 ntBASIC19.88■□□□□ 0.77
OTOP1Q7RTM1 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.88■□□□□ 0.77
OTOP1Q7RTM1 AL390754.1-201ENST00000619088 582 ntBASIC19.88■□□□□ 0.77
OTOP1Q7RTM1 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.88■□□□□ 0.77
OTOP1Q7RTM1 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
OTOP1Q7RTM1 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
OTOP1Q7RTM1 REXO1L11P-201ENST00000620964 1927 ntBASIC19.88■□□□□ 0.77
OTOP1Q7RTM1 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.88■□□□□ 0.77
OTOP1Q7RTM1 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.88■□□□□ 0.77
OTOP1Q7RTM1 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.88■□□□□ 0.77
OTOP1Q7RTM1 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.88■□□□□ 0.77
OTOP1Q7RTM1 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.88■□□□□ 0.77
OTOP1Q7RTM1 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.88■□□□□ 0.77
OTOP1Q7RTM1 PI4KAP1-204ENST00000612579 1703 ntBASIC19.88■□□□□ 0.77
OTOP1Q7RTM1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.87■□□□□ 0.77
OTOP1Q7RTM1 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
OTOP1Q7RTM1 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
OTOP1Q7RTM1 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
OTOP1Q7RTM1 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
OTOP1Q7RTM1 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.87■□□□□ 0.77
OTOP1Q7RTM1 KRT18P32-201ENST00000424695 1287 ntBASIC19.87■□□□□ 0.77
OTOP1Q7RTM1 FAM58DP-201ENST00000428076 619 ntBASIC19.87■□□□□ 0.77
OTOP1Q7RTM1 AL671277.1-201ENST00000429656 993 ntBASIC19.87■□□□□ 0.77
OTOP1Q7RTM1 AL592309.1-201ENST00000443127 649 ntBASIC19.87■□□□□ 0.77
OTOP1Q7RTM1 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.87■□□□□ 0.77
OTOP1Q7RTM1 SPDYE11-202ENST00000450699 704 ntBASIC19.87■□□□□ 0.77
OTOP1Q7RTM1 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
OTOP1Q7RTM1 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC19.87■□□□□ 0.77
OTOP1Q7RTM1 FAM86C2P-203ENST00000528684 1004 ntBASIC19.87■□□□□ 0.77
OTOP1Q7RTM1 SPDYE9P-201ENST00000570642 692 ntBASIC19.87■□□□□ 0.77
OTOP1Q7RTM1 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.87■□□□□ 0.77
OTOP1Q7RTM1 AC019129.2-201ENST00000609837 1235 ntBASIC19.87■□□□□ 0.77
OTOP1Q7RTM1 SPDYE10P-202ENST00000612005 668 ntBASIC19.87■□□□□ 0.77
OTOP1Q7RTM1 SPDYE8P-202ENST00000612377 668 ntBASIC19.87■□□□□ 0.77
OTOP1Q7RTM1 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
OTOP1Q7RTM1 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
OTOP1Q7RTM1 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
OTOP1Q7RTM1 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.87■□□□□ 0.77
OTOP1Q7RTM1 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.87■□□□□ 0.77
OTOP1Q7RTM1 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
OTOP1Q7RTM1 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
OTOP1Q7RTM1 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.87■□□□□ 0.77
OTOP1Q7RTM1 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
OTOP1Q7RTM1 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
OTOP1Q7RTM1 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
OTOP1Q7RTM1 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.86■□□□□ 0.77
OTOP1Q7RTM1 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
OTOP1Q7RTM1 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
OTOP1Q7RTM1 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.86■□□□□ 0.77
OTOP1Q7RTM1 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
OTOP1Q7RTM1 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
OTOP1Q7RTM1 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.86■□□□□ 0.77
OTOP1Q7RTM1 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
OTOP1Q7RTM1 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
OTOP1Q7RTM1 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.86■□□□□ 0.77
OTOP1Q7RTM1 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
OTOP1Q7RTM1 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
OTOP1Q7RTM1 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
OTOP1Q7RTM1 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
OTOP1Q7RTM1 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.86■□□□□ 0.77
OTOP1Q7RTM1 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.86■□□□□ 0.77
OTOP1Q7RTM1 TREML5P-201ENST00000421694 576 ntBASIC19.86■□□□□ 0.77
OTOP1Q7RTM1 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.86■□□□□ 0.77
OTOP1Q7RTM1 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.86■□□□□ 0.77
OTOP1Q7RTM1 AL513480.1-201ENST00000451731 511 ntBASIC19.86■□□□□ 0.77
OTOP1Q7RTM1 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
OTOP1Q7RTM1 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.86■□□□□ 0.77
OTOP1Q7RTM1 COQ6-210ENST00000554920 649 ntTSL 3 BASIC19.86■□□□□ 0.77
OTOP1Q7RTM1 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.86■□□□□ 0.77
OTOP1Q7RTM1 AC027307.3-201ENST00000594262 1100 ntBASIC19.86■□□□□ 0.77
OTOP1Q7RTM1 AC099522.2-201ENST00000607001 744 ntBASIC19.86■□□□□ 0.77
OTOP1Q7RTM1 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
OTOP1Q7RTM1 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.86■□□□□ 0.77
OTOP1Q7RTM1 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
OTOP1Q7RTM1 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.86■□□□□ 0.77
OTOP1Q7RTM1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
OTOP1Q7RTM1 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
OTOP1Q7RTM1 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.86■□□□□ 0.77
OTOP1Q7RTM1 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
OTOP1Q7RTM1 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
OTOP1Q7RTM1 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.86■□□□□ 0.77
OTOP1Q7RTM1 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.86■□□□□ 0.77
OTOP1Q7RTM1 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
OTOP1Q7RTM1 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
OTOP1Q7RTM1 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
OTOP1Q7RTM1 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
OTOP1Q7RTM1 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
OTOP1Q7RTM1 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
OTOP1Q7RTM1 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
OTOP1Q7RTM1 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
OTOP1Q7RTM1 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
OTOP1Q7RTM1 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms